SNAI2 (Felis catus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSFCAG00000015779 T094534_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.827 0.991
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.827 0.991
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.827 0.991
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.827 0.991
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.827 0.991
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.827 0.991
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.827 0.991
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.827 0.991
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.827 0.991
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.827 0.991
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.827 0.991
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.827 0.991
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.823 0.982
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000014634 C2H2 ZF 98 120
ENSFCAP00000014634 C2H2 ZF 129 151
ENSFCAP00000014634 C2H2 ZF 155 177
ENSFCAP00000014634 C2H2 ZF 183 205
ENSFCAP00000014634 C2H2 ZF 211 232

Links

Other C2H2 ZF family TFs
Other Felis catus TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_23221 Aegilops tauschii F775_23221 N 0.000
LPERR06G04380 Leersia perrieri LPERR06G04380 N 0.000
LPERR10G06550 Leersia perrieri LPERR10G06550 N 0.000
MLOC_10707 Hordeum vulgare MLOC_10707 N 0.000
OB06G14480 Oryza brachyantha OB06G14480 N 0.000
OBART06G04880 Oryza barthii OBART06G04880 N 0.000
ONIVA06G15050 Oryza nivara ONIVA06G15050 N 0.000
OPUNC06G04630 Oryza punctata OPUNC06G04630 N 0.000
ORGLA06G0044400 Oryza glaberrima ORGLA06G0044400 N 0.000
ORUFI06G04910 Oryza rufipogon ORUFI06G04910 N 0.000
Pavir.Ca01208 Panicum virgatum Pavir.Ca01208 N 0.000
Traes_1AL_FF8F7A939 Triticum aestivum Traes_1AL_FF8F7A939 N 0.000