zbtb42 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000006297 T095599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB42
M08351_2.00 		Homo sapiens
MRCAKCTGS
SCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE 		0.775 0.879
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000008319 C2H2 ZF 324 346
ENSGACP00000008319 C2H2 ZF 365 386
ENSGACP00000008319 C2H2 ZF 392 414
ENSGACP00000008319 C2H2 ZF 420 443

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g034340 Brassica oleracea Bo8g034340 N
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I
evm.TU.supercontig_2067.2 Carica papaya evm.TU.supercontig_2067.2 N
evm.TU.supercontig_6.10 Carica papaya evm.TU.supercontig_6.10 N
F775_31862 Aegilops tauschii F775_31862 N
GLYMA09G03390 Glycine max GLYMA09G03390 I
MDP0000223691 Malus domestica MDP0000223691 N
MTR_2g099600 Medicago truncatula MTR_2g099600 N
NBO_29g0016 Nosema bombycis NBO_29g0016 N
TRIUR3_24442 Triticum urartu TRIUR3_24442 N