zbtb20 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000020693 T095806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB20
M04599_2.00 		Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX 		0.771 0.965
ZBTB20
M04600_2.00 		Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX 		0.771 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000027362 C2H2 ZF 479 501
ENSGACP00000027362 C2H2 ZF 507 529
ENSGACP00000027362 C2H2 ZF 535 557
ENSGACP00000027362 C2H2 ZF 563 585
ENSGACP00000027362 C2H2 ZF 614 636
ENSGACP00000027363 C2H2 ZF 384 406
ENSGACP00000027363 C2H2 ZF 412 434
ENSGACP00000027363 C2H2 ZF 440 462
ENSGACP00000027363 C2H2 ZF 468 490

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000735101 Angiostrongylus costaricensis ACOC_0000735101 N
ANCCEY_08318 Ancylostoma ceylanicum ANCCEY_08318 N
ASU_12421 Ascaris suum ASU_12421 N
Bm4516 Brugia malayi Bm4516 N
BTMF_0000196601 Brugia timori BTMF_0000196601 N
BXY_0943600 Bursaphelenchus xylophilus BXY_0943600 N
CBG12652 Caenorhabditis briggsae CBG12652 N
CBN08911 Caenorhabditis brenneri CBN08911 N
CBN31474 Caenorhabditis brenneri CBN31474 N
CJA17455 Caenorhabditis japonica CJA17455 N
CRE24738 Caenorhabditis remanei CRE24738 N
DICVIV_10160 Dictyocaulus viviparus DICVIV_10160 N
DME_0000611701 Dracunculus medinensis DME_0000611701 N
GPLIN_001183200 Globodera pallida GPLIN_001183200 N
HCOI01581600 Haemonchus contortus HCOI01581600 N
L596_g8102 Steinernema carpocapsae L596_g8102 N
L889_g21858 Steinernema feltiae L889_g21858 N
L892_g27212 Steinernema scapterisci L892_g27212 N
L893_g27569 Steinernema glaseri L893_g27569 N
L898_g616 Steinernema monticolum L898_g616 N
let-607 Caenorhabditis elegans WBGene00002783 N
LOAG_10644 Loa loa LOAG_10644 N
nAv.1.0.1.g00516 Acanthocheilonema viteae nAv.1.0.1.g00516 N
nDi.2.2.2.g01644 Dirofilaria immitis nDi.2.2.2.g01644 N
NECAME_02209 Necator americanus NECAME_02209 N
PTRK_0000278100 Parastrongyloides trichosuri PTRK_0000278100 N
PTRK_0001321400 Parastrongyloides trichosuri PTRK_0001321400 N
RSKR_0000919500 Rhabditophanes kr3021 RSKR_0000919500 N
SPAL_0001235900 Strongyloides papillosus SPAL_0001235900 N
SPAL_0001311500 Strongyloides papillosus SPAL_0001311500 N
SSTP_0000280500 Strongyloides stercoralis SSTP_0000280500 N
SSTP_0000575300 Strongyloides stercoralis SSTP_0000575300 N
SVE_0150100 Strongyloides venezuelensis SVE_0150100 N
SVE_0362500 Strongyloides venezuelensis SVE_0362500 N
WUBG_03758 Wuchereria bancrofti WUBG_03758 N