CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ZBTB18 *(Gallus gallus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSGALG00000010705	T095904_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZBTB18 M02916_2.00	Homo sapiens	VMACATCTGGAWN	NWTCCAGATGTKB	SELEX Jolma et al.(2013) ZNF238_1	0.827	1.000
ZBTB18 M02917_2.00	Homo sapiens	NMACATCTGGMHN	NDKCCAGATGTKN	SELEX Jolma et al.(2013) ZNF238_2	0.827	1.000
ZBTB18 M04585_2.00	Homo sapiens	NMACATCTGGMHN	NDKCCAGATGTKN	SELEX Yin et al.(2017) ZBTB18_eDBD_HT-SELEX	0.827	1.000
ZBTB18 M08350_2.00	Homo sapiens	MRCAKCTGG	CCAGMTGYK	ChIP-seq Schmitges et al.(2016) Q99592_2-4.RCADE	0.827	1.000
ZBTB18 M08257_2.00	Homo sapiens	NMGCAGCTGCKB	VMGCAGCTGCKN	ChIP-seq Najafabadi et al.(2015b) ZNF238	0.827	1.000
ZBTB18 M08928_2.00	Homo sapiens	VMRCAKCTGGV	BCCAGMTGYKB	Misc Kulakovskiy et al.(2013) ZBT18_HUMAN.H11MO.0.C	0.827	1.000
ZBTB18 M10282_2.00	Homo sapiens	NNMACATCTGGM	KCCAGATGTKNN	Transfac Matys et al.(2006) V$RP58_01	0.827	1.000
ZBTB18 M10283_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RP58_Q3	0.827	1.000
ZBTB18 M04586_2.00	Homo sapiens	NMACATCTGBHNN	NNDVCAGATGTKN	SELEX Yin et al.(2017) ZBTB18_eDBD_Methyl-HT-SELEX	0.827	1.000
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSGALP00000017393	C2H2 ZF	370	392	FMCPLCNKVFPSPHILQIHLSTH
ENSGALP00000017393	C2H2 ZF	411	432	TCSLCGKTFSCMYTLKRHERTH
ENSGALP00000017393	C2H2 ZF	438	460	YTCTQCGKSFQYSHNLSRHAVVH
ENSGALP00000017393	C2H2 ZF	466	489	HACKWCERRFTQSGDLYRHIRKFH

Links
Other C2H2 ZF family TFs
Other *Gallus gallus* TFs

72 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
GLOTRDRAFT_141154	Gloeophyllum trabeum	GLOTRDRAFT_141154	N	0.000
HETIRDRAFT_475336	Heterobasidion irregulare	HETIRDRAFT_475336	N	0.000
JAAARDRAFT_465353	Jaapia argillacea	JAAARDRAFT_465353	N	0.000
M404DRAFT_172329	Pisolithus tinctorius	M404DRAFT_172329	N	0.000
Moror_13946	Moniliophthora roreri	Moror_13946	N	0.000
PAXRUDRAFT_74013	Paxillus rubicundulus	PAXRUDRAFT_74013	N	0.000
PLEOSDRAFT_1106869	Pleurotus ostreatus	PLEOSDRAFT_1106869	N	0.000
V565_140390	Rhizoctonia solani	V565_140390	N	0.000