ENSLACG00000009889 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000009889 T097057_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000011241 C2H2 ZF 371 393
ENSLACP00000011241 C2H2 ZF 412 433
ENSLACP00000011241 C2H2 ZF 439 461
ENSLACP00000011241 C2H2 ZF 467 490

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004929 Ailuropoda melanoleuca ENSAMEG00000004929 I
ENSBTAP00000018112-D2 Bos grunniens ENSBTAP00000018112-D2 I
ENSCSAG00000001654 Chlorocebus sabaeus ENSCSAG00000001654 I
ENSDNOG00000046251 Dasypus novemcinctus ENSDNOG00000046251 I
ENSNLEG00000010916 Nomascus leucogenys ENSNLEG00000010916 I
ENSOARG00000003593 Ovis aries ENSOARG00000003593 I
ENSP00000412999 Macaca fascicularis ENSP00000412999 I
ENSPANG00000002294 Papio anubis ENSPANG00000002294 I
ENSPPYG00000010459 Pongo abelii ENSPPYG00000010459 I
ENSSTOG00000020968 Ictidomys tridecemlineatus ENSSTOG00000020968 I
Myotis_brandtii_ZNF805_10004203 Myotis brandtii Myotis_brandtii_ZNF805_10004203 I
ZNF805 Callithrix jacchus ENSCJAG00000000024 I
ZNF805 Homo sapiens ENSG00000204524 D
ZNF805 Gorilla gorilla ENSGGOG00000011685 I
ZNF805 Oryctolagus cuniculus ENSOCUG00000029011 I
ZNF805 Otolemur garnettii ENSOGAG00000033139 I