CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSLOCG00000005429 *(Lepisosteus oculatus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSLOCG00000005429	T097635_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PRDM12 M10213_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRDM12_01	0.824	0.986
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSLOCP00000006545	C2H2 ZF	261	283	MRCVICHRGFNSRSNLRSHMRIH
ENSLOCP00000006545	C2H2 ZF	289	311	FVCRFCNRRFSQSSTLRNHVRLH
ENSLOCP00000006545	C2H2 ZF	317	341	YKCHVCQSAYSQLAGLRAHQKSARH
ENSLOCP00000006556	C2H2 ZF	245	267	MRCVICHRGFNSRSNLRSHMRIH
ENSLOCP00000006556	C2H2 ZF	273	295	FVCRFCNRRFSQSSTLRNHVRLH
ENSLOCP00000006556	C2H2 ZF	301	325	YKCHVCQSAYSQLAGLRAHQKSARH

Links
Other C2H2 ZF family TFs
Other *Lepisosteus oculatus* TFs