ENSLOCG00000008679 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000008679 T097691_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.817 0.982
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.817 0.982
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.811 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.811 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.811 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000010556 C2H2 ZF 362 383
ENSLOCP00000010556 C2H2 ZF 389 411
ENSLOCP00000010556 C2H2 ZF 710 732
ENSLOCP00000010556 C2H2 ZF 738 760
ENSLOCP00000010567 C2H2 ZF 432 453
ENSLOCP00000010567 C2H2 ZF 459 481
ENSLOCP00000010567 C2H2 ZF 780 802
ENSLOCP00000010567 C2H2 ZF 808 830
ENSLOCP00000010567 C2H2 ZF 838 861

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_224213 Agaricus bisporus AGABI2DRAFT_224213 N 0.000
BOTBODRAFT_50846 Botryobasidium botryosum BOTBODRAFT_50846 N 0.000
CERSUDRAFT_89102 Ceriporiopsis subvermispora CERSUDRAFT_89102 N 0.000
CY34DRAFT_21340 Suillus luteus CY34DRAFT_21340 N 0.000
DICSQDRAFT_163586 Dichomitus squalens DICSQDRAFT_163586 N 0.000
estExt_Genewise1.C_70735 Heterobasidion annosum estExt_Genewise1.C_70735 N 0.000
FIBRA_04563 Fibroporia radiculosa FIBRA_04563 N 0.000
FOMPIDRAFT_1031471 Fomitopsis pinicola FOMPIDRAFT_1031471 N 0.000
GALMADRAFT_238181 Galerina marginata GALMADRAFT_238181 N 0.000
GLOTRDRAFT_66280 Gloeophyllum trabeum GLOTRDRAFT_66280 N 0.000
HYDPIDRAFT_182671 Hydnomerulius pinastri HYDPIDRAFT_182671 N 0.000
JAAARDRAFT_30454 Jaapia argillacea JAAARDRAFT_30454 N 0.000
K443DRAFT_672892 Laccaria amethystina K443DRAFT_672892 N 0.000
M404DRAFT_248099 Pisolithus tinctorius M404DRAFT_248099 N 0.000
M407DRAFT_30153 Tulasnella calospora M407DRAFT_30153 N 0.000
M408DRAFT_198102 Serendipita vermifera M408DRAFT_198102 N 0.000
M413DRAFT_444187 Hebeloma cylindrosporum M413DRAFT_444187 N 0.000
M422DRAFT_55406 Sphaerobolus stellatus M422DRAFT_55406 N 0.000
Moror_12409 Moniliophthora roreri Moror_12409 N 0.000
PAXRUDRAFT_143066 Paxillus rubicundulus PAXRUDRAFT_143066 N 0.000
PHACADRAFT_262394 Phanerochaete carnosa PHACADRAFT_262394 N 0.000
PHLGIDRAFT_126149 Phlebiopsis gigantea PHLGIDRAFT_126149 N 0.000
PIIN_00682 Piriformospora indica PIIN_00682 N 0.000
PILCRDRAFT_812975 Piloderma croceum PILCRDRAFT_812975 N 0.000
PISMIDRAFT_684265 Pisolithus microcarpus PISMIDRAFT_684265 N 0.000
SCHCODRAFT_81726 Schizophyllum commune SCHCODRAFT_81726 N 0.000
SERLA73DRAFT_55337 Serpula lacrymans SERLA73DRAFT_55337 N 0.000