BCL11B (Macaca mulatta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMMUG00000003261 T099137_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.827 1.000
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.827 1.000
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.806 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.806 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000004345 C2H2 ZF 428 449
ENSMMUP00000004345 C2H2 ZF 455 477
ENSMMUP00000004345 C2H2 ZF 796 818
ENSMMUP00000004345 C2H2 ZF 824 846
ENSMMUP00000004345 C2H2 ZF 854 877
ENSMMUP00000004346 C2H2 ZF 357 378
ENSMMUP00000004346 C2H2 ZF 384 406
ENSMMUP00000004346 C2H2 ZF 725 747
ENSMMUP00000004346 C2H2 ZF 753 775
ENSMMUP00000004346 C2H2 ZF 783 806

Links

Other C2H2 ZF family TFs
Other Macaca mulatta TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00067720 Amborella trichopoda AMTR_s00004p00067720 N
BGIOSGA010118 Oryza indica BGIOSGA010118 N
BRADI1G13207 Brachypodium distachyon BRADI1G13207 N
cassava10020.m1 Manihot esculenta cassava10020.m1 N
Ciclev10017173m.g Citrus clementina Ciclev10017173m.g N
Eucgr.J01756 Eucalyptus grandis Eucgr.J01756 N
F775_42487 Aegilops tauschii F775_42487 N
gene01596-v1.0-hybrid Fragaria vesca gene01596-v1.0-hybrid N
GRMZM2G149219 Zea mays GRMZM2G149219 N
GSMUA_Achr3G30880_001 Musa acuminata GSMUA_Achr3G30880_001 N
LPERR03G23380 Leersia perrieri LPERR03G23380 N
MDP0000263900 Malus domestica MDP0000263900 I
MLOC_16746 Hordeum vulgare MLOC_16746 N
MLOC_19031 Hordeum vulgare MLOC_19031 I
OB03G35830 Oryza brachyantha OB03G35830 N
OBART03G28190 Oryza barthii OBART03G28190 N
OGLUM03G28820 Oryza glumaepatula OGLUM03G28820 N
OMERI03G24810 Oryza meridionalis OMERI03G24810 N
ONIVA03G29220 Oryza nivara ONIVA03G29220 N
OPUNC03G25700 Oryza punctata OPUNC03G25700 N
orange1.1g032690m.g Citrus sinensis orange1.1g032690m.g N
ORGLA03G0260500 Oryza glaberrima ORGLA03G0260500 N
ORUFI03G29320 Oryza rufipogon ORUFI03G29320 N
OS03G0657400 Oryza sativa OS03G0657400 N
Pavir.J22786 Panicum virgatum Pavir.J22786 N
POPTR_0001s03970 Populus trichocarpa POPTR_0001s03970 N
POPTR_0003s20860 Populus trichocarpa POPTR_0003s20860 N
SapurV1A.0081s0610 Salix purpurea SapurV1A.0081s0610 N
Sb01g012870 Sorghum bicolor Sb01g012870 N
Si038001m.g Setaria italica Si038001m.g N
Si038955m.g Setaria italica Si038955m.g N
TRAES3BF090100100CFD_g Triticum aestivum TRAES3BF090100100CFD_g I
Traes_3AL_3160E1F30 Triticum aestivum Traes_3AL_3160E1F30 I
Traes_4AL_234E1CDF6 Triticum aestivum Traes_4AL_234E1CDF6 N
Traes_4DS_CFC487CE5 Triticum aestivum Traes_4DS_CFC487CE5 N
TRIUR3_34281 Triticum urartu TRIUR3_34281 I