CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GTF3A
(
Macaca mulatta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMMUG00000009029
T099285_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF3A
M08301_2.00
Homo sapiens
CTCCCATCC
GGATGGGAG
ChIP-seq
Schmitges et al.(2016)
Q92664_3-5.RCADE
0.825
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000011834
C2H2 ZF
131
155
FVCDYEGCGKAFIRDYHLSRHILTH
ENSMMUP00000011834
C2H2 ZF
161
186
FVCAANGCGQKFNTKSNLKKHFERKH
ENSMMUP00000011834
C2H2 ZF
193
217
YICSFEDCRKAFKKHQQLKIHQCQH
ENSMMUP00000011834
C2H2 ZF
223
247
FKCTQEGCGKHFASPSKLKRHAKTH
ENSMMUP00000011834
C2H2 ZF
250
274
YVCQKGCSFVAKTWTELLKHVRETH
ENSMMUP00000011834
C2H2 ZF
279
300
LCEVCQKTFKRKDYLKQHMKTH
ENSMMUP00000011834
C2H2 ZF
307
332
CRCPREGCGRTYTTVFNLQSHILSFH
ENSMMUP00000011834
C2H2 ZF
338
362
FVCEHAGCGKTFAMKQSLTRHAVVH
ENSMMUP00000011835
C2H2 ZF
98
122
FICSFPDCSANYSKAWKLDAHLCKH
ENSMMUP00000011835
C2H2 ZF
128
152
FVCDYEGCGKAFIRDYHLSRHILTH
ENSMMUP00000011835
C2H2 ZF
158
183
FVCAANGCGQKFNTKSNLKKHFERKH
ENSMMUP00000011835
C2H2 ZF
190
214
YICSFEDCRKAFKKHQQLKIHQCQH
ENSMMUP00000011835
C2H2 ZF
220
244
FKCTQEGCGKHFASPSKLKRHAKTH
ENSMMUP00000011835
C2H2 ZF
247
271
YVCQKGCSFVAKTWTELLKHVRETH
ENSMMUP00000011835
C2H2 ZF
276
297
LCEVCQKTFKRKDYLKQHMKTH
ENSMMUP00000011835
C2H2 ZF
304
329
CRCPREGCGRTYTTVFNLQSHILSFH
ENSMMUP00000011835
C2H2 ZF
335
359
FVCEHAGCGKTFAMKQSLTRHAVVH
Links
Other
C2H2 ZF
family TFs
Other
Macaca mulatta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin109166
Clonorchis sinensis
csin109166
N
ECANG7_05389
Echinococcus canadensis
ECANG7_05389
N
HDID_0000253901
Hymenolepis diminuta
HDID_0000253901
N
Sjc_0030830
Schistosoma japonicum
Sjc_0030830
N
Smp_012010
Schistosoma mansoni
Smp_012010
N
SMU15014216
Schmidtea mediterranea
SMU15014216
N
T265_07745
Opisthorchis viverrini
T265_07745
N
TsM_000073400
Taenia solium
TsM_000073400
N