ZNF454 (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000029119 T103232_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.794 0.949
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.794 0.949
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.794 0.949
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.794 0.949
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.794 0.949
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.794 0.949
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.794 0.949
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000027004 C2H2 ZF 89 111
ENSOCUP00000027004 C2H2 ZF 128 150
ENSOCUP00000027004 C2H2 ZF 156 178
ENSOCUP00000027004 C2H2 ZF 184 206
ENSOCUP00000027004 C2H2 ZF 212 234
ENSOCUP00000027004 C2H2 ZF 240 262
ENSOCUP00000027004 C2H2 ZF 268 290
ENSOCUP00000027004 C2H2 ZF 296 318
ENSOCUP00000027004 C2H2 ZF 324 346
ENSOCUP00000027004 C2H2 ZF 352 374
ENSOCUP00000027004 C2H2 ZF 380 402
ENSOCUP00000027004 C2H2 ZF 408 430

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000016859-D1 Bos grunniens ENSBTAP00000016859-D1 I 0.794
ENSCSAG00000008562 Chlorocebus sabaeus ENSCSAG00000008562 I 0.794
ENSMMUG00000008980 Macaca mulatta ENSMMUG00000008980 I 0.789
ENSMPUG00000000725 Mustela putorius furo ENSMPUG00000000725 I 0.795
ENSNLEG00000001430 Nomascus leucogenys ENSNLEG00000001430 I 0.794
ENSOARG00000004411 Ovis aries ENSOARG00000004411 I 0.793
ENSP00000326249 Macaca fascicularis ENSP00000326249 I 0.789
ENSPANG00000009509 Papio anubis ENSPANG00000009509 I 0.788
Zfp454 Mus musculus ENSMUSG00000048728 I 0.760
ZNF454 Callithrix jacchus ENSCJAG00000018857 I 0.794
ZNF454 Canis familiaris ENSCAFG00000031168 I 0.795
ZNF454 Choloepus hoffmanni ENSCHOG00000002770 I 0.787
ZNF454 Tursiops truncatus ENSTTRG00000012880 I 0.798
ZNF454 Tupaia belangeri ENSTBEG00000000346 I 0.763
ZNF454 Sus scrofa ENSSSCG00000027351 I 0.806
Znf454 Rattus norvegicus ENSRNOG00000022971 I 0.771
ZNF454 Pteropus vampyrus ENSPVAG00000007676 I 0.794
ZNF454 Pan troglodytes ENSPTRG00000017611 I 0.794
ZNF454 Gorilla gorilla ENSGGOG00000022508 I 0.794
ZNF454 Ochotona princeps ENSOPRG00000009035 I 0.797
ZNF454 Equus caballus ENSECAG00000005115 I 0.796
ZNF454 Erinaceus europaeus ENSEEUG00000007684 I 0.793
ZNF454 Bos taurus ENSBTAG00000004262 I 0.794
ZNF454 Felis catus ENSFCAG00000021971 I 0.795
ZNF454 Homo sapiens ENSG00000178187 D 0.794
ZNF454 Myotis lucifugus ENSMLUG00000002894 I 0.784