SCRT2 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000031187 T103812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.827 0.991
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.827 0.991
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.827 0.991
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.786 0.900
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.786 0.900
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.786 0.900
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.786 0.900
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.774 0.845
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.774 0.845
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.774 0.845
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.774 0.845
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.758 0.809
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.758 0.809
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.758 0.809
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000015769 C2H2 ZF 155 177
ENSOGAP00000015769 C2H2 ZF 187 208
ENSOGAP00000015769 C2H2 ZF 212 234
ENSOGAP00000015769 C2H2 ZF 240 262
ENSOGAP00000015769 C2H2 ZF 268 286

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_209306 Agaricus bisporus AGABI2DRAFT_209306 I 0.000
aod-2 Neurospora crassa NCU03352 D 0.000
BOTBODRAFT_69322 Botryobasidium botryosum BOTBODRAFT_69322 I 0.000
CC1G_09476 Coprinopsis cinerea CC1G_09476 I 0.000
CERSUDRAFT_114695 Ceriporiopsis subvermispora CERSUDRAFT_114695 I 0.000
CY34DRAFT_60788 Suillus luteus CY34DRAFT_60788 I 0.000
DACRYDRAFT_22521 Dacryopinax sp DACRYDRAFT_22521 I 0.000
DICSQDRAFT_88737 Dichomitus squalens DICSQDRAFT_88737 I 0.000
FIBRA_01395 Fibroporia radiculosa FIBRA_01395 I 0.000
FOMPIDRAFT_1116881 Fomitopsis pinicola FOMPIDRAFT_1116881 I 0.000
GALMADRAFT_259271 Galerina marginata GALMADRAFT_259271 I 0.000
GLOTRDRAFT_118212 Gloeophyllum trabeum GLOTRDRAFT_118212 I 0.000
gwh2.4.337.1 Phanerochaete chrysosporium gwh2.4.337.1 I 0.000
HETIRDRAFT_238331 Heterobasidion irregulare HETIRDRAFT_238331 I 0.000
HYDPIDRAFT_89380 Hydnomerulius pinastri HYDPIDRAFT_89380 I 0.000
JAAARDRAFT_59018 Jaapia argillacea JAAARDRAFT_59018 I 0.000
K443DRAFT_308353 Laccaria amethystina K443DRAFT_308353 I 0.000
K443DRAFT_681331 Laccaria amethystina K443DRAFT_681331 I 0.000
LACBIDRAFT_167431 Laccaria bicolor LACBIDRAFT_167431 I 0.000
LACBIDRAFT_254568 Laccaria bicolor LACBIDRAFT_254568 I 0.000
LACBIDRAFT_254611 Laccaria bicolor LACBIDRAFT_254611 I 0.000
M378DRAFT_74968 Amanita muscaria M378DRAFT_74968 I 0.000
M404DRAFT_1005497 Pisolithus tinctorius M404DRAFT_1005497 I 0.000
M407DRAFT_11510 Tulasnella calospora M407DRAFT_11510 I 0.000
M408DRAFT_332528 Serendipita vermifera M408DRAFT_332528 I 0.000
M413DRAFT_449306 Hebeloma cylindrosporum M413DRAFT_449306 I 0.000
Moror_16036 Moniliophthora roreri Moror_16036 I 0.000
PAXINDRAFT_140170 Paxillus involutus PAXINDRAFT_140170 I 0.000
PAXRUDRAFT_36013 Paxillus rubicundulus PAXRUDRAFT_36013 I 0.000
PILCRDRAFT_528412 Piloderma croceum PILCRDRAFT_528412 I 0.000
PISMIDRAFT_102262 Pisolithus microcarpus PISMIDRAFT_102262 I 0.000
PLEOSDRAFT_1032088 Pleurotus ostreatus PLEOSDRAFT_1032088 I 0.000
POSPLDRAFT_96343 Postia placenta POSPLDRAFT_96343 I 0.000
RO3G_02623 Rhizopus oryzae RO3G_02623 N 0.000
SCHCODRAFT_110010 Schizophyllum commune SCHCODRAFT_110010 D 0.000
SCLCIDRAFT_97185 Scleroderma citrinum SCLCIDRAFT_97185 I 0.000
SERLA73DRAFT_126671 Serpula lacrymans SERLA73DRAFT_126671 I 0.000
V565_176590 Rhizoctonia solani V565_176590 I 0.000
WALSEDRAFT_60818 Wallemia sebi WALSEDRAFT_60818 I 0.000