CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zic6
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000001641
T104720_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000002038
C2H2 ZF
233
251
CSRAFGTMYELVTHVTVEH
ENSORLP00000002038
C2H2 ZF
260
287
YVCHWENCPRDRKPFKAKYKLVNHVRVH
ENSORLP00000002038
C2H2 ZF
293
317
FPCPFHGCEKVFARSENLKIHKRTH
ENSORLP00000002038
C2H2 ZF
333
357
FKCEFEGCNRRFANSSDRKKHSHVH
ENSORLP00000002038
C2H2 ZF
363
387
YMCKVRGCDKCYTHPSSLRKHMKLH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_005775
Oryza longistaminata
OLONG_005775
N
ONIVA11G06140
Oryza nivara
ONIVA11G06140
N
ORGLA11G0055600
Oryza glaberrima
ORGLA11G0055600
N
ORUFI11G06240
Oryza rufipogon
ORUFI11G06240
N
OS11G0206300
Oryza sativa
OS11G0206300
N