CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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sall4
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000016130
T104955_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000020188
C2H2 ZF
355
377
HKCKYCGKTFGNDSALQIHLRSH
ENSORLP00000020188
C2H2 ZF
383
405
FKCNICGNRFTTKGNLKVHFQRH
ENSORLP00000020188
C2H2 ZF
546
567
ECVICHRVLSCQSSLKMHYRTH
ENSORLP00000020188
C2H2 ZF
573
595
YKCKICGRAFSTKGNLKAHYGVH
ENSORLP00000020188
C2H2 ZF
605
627
HSCPICQKKFTNAVVLQQHIRMH
ENSORLP00000020188
C2H2 ZF
892
914
HMCNACGKNFSSASALQIHERTH
ENSORLP00000020188
C2H2 ZF
920
942
FACHICGRAFTTKGNLKVHIGTH
ENSORLP00000020189
C2H2 ZF
355
377
HKCKYCGKTFGNDSALQIHLRSH
ENSORLP00000020189
C2H2 ZF
383
405
FKCNICGNRFTTKGNLKVHFQRH
ENSORLP00000020189
C2H2 ZF
536
557
ECVICHRVLSCQSSLKMHYRTH
ENSORLP00000020189
C2H2 ZF
563
585
YKCKICGRAFSTKGNLKAHYGVH
ENSORLP00000020189
C2H2 ZF
595
617
HSCPICQKKFTNAVVLQQHIRMH
ENSORLP00000020189
C2H2 ZF
869
891
HMCNACGKNFSSASALQIHERTH
ENSORLP00000020189
C2H2 ZF
897
919
FACHICGRAFTTKGNLKVHIGTH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000003822
Gadus morhua
ENSGMOG00000003822
N
0.819
ENSLOCG00000002427
Lepisosteus oculatus
ENSLOCG00000002427
N
0.815
ENSONIG00000016557
Oreochromis niloticus
ENSONIG00000016557
N
0.819
ENSPFOG00000001442
Poecilia formosa
ENSPFOG00000001442
N
0.819
ENSXMAG00000012692
Xiphophorus maculatus
ENSXMAG00000012692
N
0.819
sall4
Danio rerio
ENSDARG00000044485
N
0.815
sall4
Gasterosteus aculeatus
ENSGACG00000011124
N
0.817
sall4
Tetraodon nigroviridis
ENSTNIG00000012460
N
0.809
sall4
Takifugu rubripes
ENSTRUG00000007410
N
0.809