ENSPFOG00000007302 (Poecilia formosa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPFOG00000007302 T106185_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.815 0.939
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.815 0.939
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.815 0.939
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.811 0.921
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.811 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000007271 C2H2 ZF 378 399
ENSPFOP00000007271 C2H2 ZF 405 427
ENSPFOP00000007271 C2H2 ZF 718 740
ENSPFOP00000007271 C2H2 ZF 746 768
ENSPFOP00000007271 C2H2 ZF 776 799
ENSPFOP00000029898 C2H2 ZF 375 396
ENSPFOP00000029898 C2H2 ZF 402 424
ENSPFOP00000029898 C2H2 ZF 681 703
ENSPFOP00000029898 C2H2 ZF 709 731
ENSPFOP00000029898 C2H2 ZF 739 762

Links

Other C2H2 ZF family TFs
Other Poecilia formosa TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005839 Oryza indica BGIOSGA005839 N 0.000
BGIOSGA014504 Oryza indica BGIOSGA014504 N 0.000
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N 0.000
GRMZM2G028438 Zea mays GRMZM2G028438 N 0.000
GRMZM2G109869 Zea mays GRMZM2G109869 N 0.000
GRMZM2G173429 Zea mays GRMZM2G173429 N 0.000
LPERR04G18520 Leersia perrieri LPERR04G18520 N 0.000
MLOC_72117 Hordeum vulgare MLOC_72117 N 0.000
OB02G35300 Oryza brachyantha OB02G35300 N 0.000
OBART02G28020 Oryza barthii OBART02G28020 N 0.000
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N 0.000
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N 0.000
OMERI02G27200 Oryza meridionalis OMERI02G27200 N 0.000
OMERI04G19030 Oryza meridionalis OMERI04G19030 N 0.000
ONIVA02G31120 Oryza nivara ONIVA02G31120 N 0.000
ONIVA04G21910 Oryza nivara ONIVA04G21910 N 0.000
OPUNC02G25720 Oryza punctata OPUNC02G25720 N 0.000
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N 0.000
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N 0.000
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N 0.000
OS02G0681900 Oryza sativa OS02G0681900 N 0.000
OS04G0580300 Oryza sativa OS04G0580300 N 0.000
Pavir.Aa00944 Panicum virgatum Pavir.Aa00944 N 0.000
Pavir.Ga00626 Panicum virgatum Pavir.Ga00626 N 0.000
Pavir.J39953 Panicum virgatum Pavir.J39953 N 0.000
Sb04g031770 Sorghum bicolor Sb04g031770 N 0.000
Si009601m.g Setaria italica Si009601m.g N 0.000
Si016627m.g Setaria italica Si016627m.g N 0.000
Traes_2BL_46E59998A1 Triticum aestivum Traes_2BL_46E59998A1 N 0.000