ENSPSIG00000000487 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000000487 T107356_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.758 0.910
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.758 0.910
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.758 0.910
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.758 0.910
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.758 0.910
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.758 0.910
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.758 0.910
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.758 0.910
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.758 0.910
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000000487 C2H2 ZF 348 370
ENSPSIP00000000487 C2H2 ZF 389 410
ENSPSIP00000000487 C2H2 ZF 416 438
ENSPSIP00000000487 C2H2 ZF 446 467

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_027820 Acremonium chrysogenum ACRE_027820 N 0.000
AOL_s00054g391 Arthrobotrys oligospora AOL_s00054g391 N 0.000
BBA_05381 Beauveria bassiana BBA_05381 N 0.000
Bcin11g00690 Botrytis cinerea Bcin11g00690 N 0.000
BGHDH14_bgh02200 Blumeria graminis BGHDH14_bgh02200 N 0.000
CCM_04601 Cordyceps militaris CCM_04601 N 0.000
CFIO01_08107 Colletotrichum fioriniae CFIO01_08107 N 0.000
Cob_07699 Colletotrichum orbiculare Cob_07699 N 0.000
CSUB01_05147 Colletotrichum sublineola CSUB01_05147 N 0.000
estExt_Genewise1Plus.C_60317 Neurospora discreta estExt_Genewise1Plus.C_60317 N 0.000
EV44_g5282 Erysiphe necator EV44_g5282 N 0.000
F503_08558 Ophiostoma piceae uamh F503_08558 N 0.000
FFUJ_06082 Fusarium fujikuroi FFUJ_06082 N 0.000
fgenesh1_pm.sca_2_chr3_3_0000327 Nectria haematococca fgenesh1_pm.sca_2_chr3_3_0000327 N 0.000
FGRRES_08431 Fusarium graminearum FGRRES_08431 N 0.000
FOXG_03227 Fusarium oxysporum FOXG_03227 N 0.000
FPSE_05040 Fusarium pseudograminearum FPSE_05040 N 0.000
GGTG_01655 Gaeumannomyces graminis GGTG_01655 N 0.000
GLRG_08850 Colletotrichum graminicola GLRG_08850 N 0.000
GMDG_05689 Pseudogymnoascus destructans GMDG_05689 N 0.000
H072_779 Dactylellina haptotyla H072_779 N 0.000
MAJ_00099 Metarhizium majus MAJ_00099 N 0.000
MANI_028549 Metarhizium anisopliae MANI_028549 N 0.000
MBM_05874 Marssonina brunnea MBM_05874 N 0.000
MGG_08875 Magnaporthe oryzae MGG_08875 N 0.000
MYCTH_2306870 Myceliophthora thermophila MYCTH_2306870 N 0.000
NCU04773 Neurospora crassa NCU04773 N 0.000
NechaG91927 Fusarium solani NechaG91927 N 0.000
NEUTE1DRAFT_87140 Neurospora tetrasperma NEUTE1DRAFT_87140 N 0.000
PFICI_03093 Pestalotiopsis fici PFICI_03093 N 0.000
PODANS_4_8950 Podospora anserina PODANS_4_8950 N 0.000
PV09_05386 Verruconis gallopava PV09_05386 N 0.000
S40285_04802 Stachybotrys chlorohalonata S40285_04802 N 0.000
S40288_06430 Stachybotrys chartarum S40288_06430 N 0.000
SMAC_03408 Sordaria macrospora SMAC_03408 N 0.000
TRIATDRAFT_223478 Trichoderma atroviride TRIATDRAFT_223478 N 0.000
TRIVIDRAFT_67483 Trichoderma virens TRIVIDRAFT_67483 N 0.000
V499_05253 Pseudogymnoascus pannorum V499_05253 N 0.000
VDAG_01608 Verticillium dahliae VDAG_01608 N 0.000
VDBG_08112 Verticillium alfalfae VDBG_08112 N 0.000
VDBG_08112 Verticillium albo atrum VDBG_08112 N 0.000
VHEMI06811 Torrubiella hemipterigena VHEMI06811 N 0.000
X797_000578 Metarhizium robertsii X797_000578 N 0.000