CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF8
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000011584
T108060_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF8
M08401_2.00
Homo sapiens
NNBVYGGTAYGYCHHNDH
DHNDDGRCRTACCRBVNN
ChIP-seq
Schmitges et al.(2016)
P17098_1-6.RCADE
0.827
1.000
ZNF8
M07781_2.00
Homo sapiens
RYRTACCRCWKY
RMWGYGGTAYRY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF8.RCADE.OriginalMapping
0.827
1.000
ZNF8
M08961_2.00
Homo sapiens
TCCATTGTATGGATRTACCACA
TGTGGTAYATCCATACAATGGA
Misc
Kulakovskiy et al.(2013)
ZNF8_HUMAN.H11MO.0.C
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000019925
C2H2 ZF
257
279
YKCTDCGKSFNHNAHLTVHKRIH
ENSPTRP00000019925
C2H2 ZF
285
307
YMCKECGKAFSQNSSLVQHERIH
ENSPTRP00000019925
C2H2 ZF
313
335
YKCAECGKSFCHSTHLTVHRRIH
ENSPTRP00000019925
C2H2 ZF
341
363
YECQDCGRAFNQNSSLGRHKRTH
ENSPTRP00000019925
C2H2 ZF
369
391
YTCSVCGKSFSRTTCLFLHLRTH
ENSPTRP00000019925
C2H2 ZF
397
419
YECNHCGKGFRHSSSLAQHQRKH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP23524
Atta cephalotes
ACEP23524
I
Brh_R001114
Buceros rhinoceros
Brh_R001114
I
CLEC004107
Cimex lectularius
CLEC004107
I
DAPPUDRAFT_314805
Daphnia pulex
DAPPUDRAFT_314805
I
ENSAPLG00000011496
Anas platyrhynchos
ENSAPLG00000011496
I
ENSGMOG00000001314
Gadus morhua
ENSGMOG00000001314
I
HHAL008503-PA
Halyomorpha halys
HHAL008503-PA
N
L798_14024
Zootermopsis nevadensis
L798_14024
I
smad3
Xenopus tropicalis
XB-GENE-481992
I
SMAR008230
Strigamia maritima
SMAR008230
I
Tal_R011237
Tyto alba
Tal_R011237
I