CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC102549115
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000046867
T109264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000065656
C2H2 ZF
23
45
YECDECRKTFSLEQHFVEHKKTH
ENSRNOP00000065656
C2H2 ZF
52
72
ECTGCGEEFSKASSLTRHLRS
ENSRNOP00000065656
C2H2 ZF
79
101
YKCGNCGRTFSQRGNFLSHQKQH
ENSRNOP00000065656
C2H2 ZF
131
153
YACKECGKAFNGKSYLKEHEKIH
ENSRNOP00000065656
C2H2 ZF
159
181
FECNQCGRAFSQKQYLIKHQNVH
ENSRNOP00000065656
C2H2 ZF
187
209
FKCNECGKAFSQKENLIIHQRIH
ENSRNOP00000065656
C2H2 ZF
215
237
YECKGCGKAFIQKSSLIRHQRSH
ENSRNOP00000065656
C2H2 ZF
243
265
YTCKECGKAFSGKSNLTEHEKIH
ENSRNOP00000065656
C2H2 ZF
271
293
YKCNECGTIFRQKQYLIKHHNIH
ENSRNOP00000065656
C2H2 ZF
299
321
YECNKCGKAFSRITSLIVHVRIH
ENSRNOP00000065656
C2H2 ZF
327
349
YECKVCGKAFCQSSSLTVHMRSH
ENSRNOP00000065656
C2H2 ZF
355
377
YGCNECGKAFSQFSTLALHMRIH
ENSRNOP00000065656
C2H2 ZF
383
405
YQCSECGKAFSQKSHHIRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_079170
Acremonium chrysogenum
ACRE_079170
N
BBA_04448
Beauveria bassiana
BBA_04448
N
CFIO01_10935
Colletotrichum fioriniae
CFIO01_10935
N
CH063_07408
Colletotrichum higginsianum
CH063_07408
N
CSUB01_03837
Colletotrichum sublineola
CSUB01_03837
N
EURHEDRAFT_72344
Aspergillus ruber
EURHEDRAFT_72344
N
FFUJ_01364
Fusarium fujikuroi
FFUJ_01364
N
fgenesh1_pm.sca_1_chr1_3_0000112
Nectria haematococca
fgenesh1_pm.sca_1_chr1_3_0000112
N
FGRRES_01172
Fusarium graminearum
FGRRES_01172
N
FOXG_00219
Fusarium oxysporum
FOXG_00219
N
FPSE_02603
Fusarium pseudograminearum
FPSE_02603
N
FVEG_01299
Fusarium verticillioides
FVEG_01299
N
GLRG_04054
Colletotrichum graminicola
GLRG_04054
N
MAJ_02155
Metarhizium majus
MAJ_02155
N
MANI_024672
Metarhizium anisopliae
MANI_024672
N
MBR_03632
Metarhizium brunneum
MBR_03632
N
MGU_04822
Metarhizium guizhouense
MGU_04822
N
NechaG89979
Fusarium solani
NechaG89979
N
NFIA_003270
Neosartorya fischeri
CADNFIAG00000089
N
OCS_04252
Ophiocordyceps sinensis
OCS_04252
N
S40285_00886
Stachybotrys chlorohalonata
S40285_00886
N
S40288_08147
Stachybotrys chartarum
S40288_08147
N
TRIATDRAFT_221642
Trichoderma atroviride
TRIATDRAFT_221642
N
TRIREDRAFT_78895
Trichoderma reesei
TRIREDRAFT_78895
N
TRIVIDRAFT_35417
Trichoderma virens
TRIVIDRAFT_35417
N
UV8b_5696
Ustilaginoidea virens
UV8b_5696
N
VHEMI06418
Torrubiella hemipterigena
VHEMI06418
N
X797_003689
Metarhizium robertsii
X797_003689
N