CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp184
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000061612
T109369_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF184
M08285_2.00
Homo sapiens
TCYTCWCCA
TGGWGARGA
ChIP-seq
Schmitges et al.(2016)
Q99676_4-6.RCADE
0.791
0.908
ZNF184
M07571_2.00
Homo sapiens
NNNNNBNNNNNNAYKCNHCTTTCYMDB
VHKRGAAAGDNGMRTNNNNNNVNNNNN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF184.RCADE.ReprocessedData
0.791
0.908
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000069240
C2H2 ZF
127
149
CKCNECGKAFTYCSALIRHQRTH
ENSRNOP00000069240
C2H2 ZF
155
177
YKCNDCNKAFSRNENLINHQRIH
ENSRNOP00000069240
C2H2 ZF
183
205
YKCDQCGKGFIEGPSLTQHQRIH
ENSRNOP00000069240
C2H2 ZF
211
233
YKCDECGKAFSQRTHLVQHQRIH
ENSRNOP00000069240
C2H2 ZF
239
261
YTCNECGKSFSQRGHFMEHQKIH
ENSRNOP00000069240
C2H2 ZF
267
289
FKCEECEKTFTRSTHLTQHQKIH
ENSRNOP00000069240
C2H2 ZF
295
317
YKCNECGKAFNGPSTFIRHHMIH
ENSRNOP00000069240
C2H2 ZF
323
345
YECNECGKAFSQHSNLTQHQKTH
ENSRNOP00000069240
C2H2 ZF
351
373
YDCAECGKAFSYWSSLAQHLKIH
ENSRNOP00000069240
C2H2 ZF
379
401
YKCSDCGKAFSYCSSLTQHRRIH
ENSRNOP00000069240
C2H2 ZF
407
429
FECSECGKAFSYLSNLNQHQKTH
ENSRNOP00000069240
C2H2 ZF
435
457
YECKECGKAFIRSSSLAKHERIH
ENSRNOP00000069240
C2H2 ZF
463
485
YQCLECGKTFSYGSSLIQHKKIH
ENSRNOP00000069240
C2H2 ZF
491
513
YKCNECERAFNQKIHLTQHKRIH
ENSRNOP00000069240
C2H2 ZF
519
541
YACPKCGKTFRHCSSLAQHQKTH
ENSRNOP00000069240
C2H2 ZF
547
569
YQCNKCEKTFSQKSHLTQHQQVH
ENSRNOP00000069240
C2H2 ZF
575
597
YKCNDCDRCFTQSTHLTEHQSIH
ENSRNOP00000069240
C2H2 ZF
606
625
NVCPQTFNQNTYLTQHQKIH
ENSRNOP00000069240
C2H2 ZF
631
653
FVCEDCGKAFQYRSALTKHQRLH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_kg.C_scaffold_4000617
Phytophthora capsici
fgenesh1_kg.C_scaffold_4000617
N