CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PATZ1
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000010027
T110337_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000010698
C2H2 ZF
304
326
LPCGLCGKVFTDANRLRQHEAQH
ENSSSCP00000010698
C2H2 ZF
368
389
ACEICGKIFRDVYHLNRHKLSH
ENSSSCP00000010698
C2H2 ZF
395
417
YSCPVCGLRFKRKDRMSYHVRSH
ENSSSCP00000010698
C2H2 ZF
425
448
YICQSCGKGFSRPDHLNGHIKQVH
ENSSSCP00000010698
C2H2 ZF
454
476
HKCQTCNASFATRDRLRSHLACH
ENSSSCP00000019315
C2H2 ZF
292
314
LPCGLCGKVFTDANRLRQHEAQH
ENSSSCP00000019315
C2H2 ZF
356
377
ACEICGKIFRDVYHLNRHKLSH
ENSSSCP00000019315
C2H2 ZF
383
405
YSCPVCGLRFKRKDRMSYHVRSH
ENSSSCP00000019315
C2H2 ZF
413
436
YICQSCGKGFSRPDHLNGHIKQVH
ENSSSCP00000019315
C2H2 ZF
442
464
HKCQTCNASFATRDRLRSHLACH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01715
Capronia coronata
A1O1_01715
I
A1O3_08338
Capronia epimyces
A1O3_08338
N
A1O5_11047
Cladophialophora psammophila
A1O5_11047
N
A1O7_05233
Cladophialophora yegresii
A1O7_05233
N
A1O9_12607
Exophiala aquamarina
A1O9_12607
N
AB06230.1
Alternaria brassicicola
AB06230.1
I
ACLA_027040
Aspergillus clavatus
CADACLAG00002999
I
ACRE_005080
Acremonium chrysogenum
ACRE_005080
I
ARB_04236
Arthroderma benhamiae
ARB_04236
I
AUEXF2481DRAFT_1990
Aureobasidium subglaciale
AUEXF2481DRAFT_1990
I
BAUCODRAFT_53101
Baudoinia compniacensis
BAUCODRAFT_53101
I
BBA_03162
Beauveria bassiana
BBA_03162
I
Bcin02g02300
Botrytis cinerea
Bcin02g02300
I
BDDG_09774
Blastomyces dermatitidis
BDDG_09774
I
BGHDH14_bgh06823
Blumeria graminis
BGHDH14_bgh06823
I
CADAFLAG00004136
Aspergillus flavus
CADAFLAG00004136
I
CADANGAG00006293
Aspergillus niger
CADANGAG00006293
I
CCM_04761
Cordyceps militaris
CCM_04761
I
CFIO01_13406
Colletotrichum fioriniae
CFIO01_13406
I
CGGC5_10716
Colletotrichum gloeosporioides
CGGC5_10716
I
CH063_01246
Colletotrichum higginsianum
CH063_01246
I
CHGG_10355
Chaetomium globosum
CHGG_10355
I
CIMG_02531
Coccidioides immitis
CIMG_02531
I
CMQ_4895
Grosmannia clavigera
CMQ_4895
I
Cob_07346
Colletotrichum orbiculare
Cob_07346
I
COCC4DRAFT_22296
Bipolaris maydis
COCC4DRAFT_22296
I
COCCADRAFT_82828
Bipolaris zeicola
COCCADRAFT_82828
I
COCMIDRAFT_85952
Bipolaris oryzae
COCMIDRAFT_85952
I
COCSADRAFT_102218
Bipolaris sorokiniana
COCSADRAFT_102218
I
COCVIDRAFT_85650
Bipolaris victoriae
COCVIDRAFT_85650
I
CPC735_037910
Coccidioides posadasii
CPC735_037910
I
CPUR_08385
Claviceps purpurea
CPUR_08385
I
CSUB01_09077
Colletotrichum sublineola
CSUB01_09077
I
CTHT_0008390
Chaetomium thermophilum
CTHT_0008390
I
DOTSEDRAFT_69772
Dothistroma septosporum
DOTSEDRAFT_69772
I
EPUS_06822
Endocarpon pusillum
EPUS_06822
I
EURHEDRAFT_22412
Aspergillus ruber
EURHEDRAFT_22412
I
EV44_g0919
Erysiphe necator
EV44_g0919
I
F503_04373
Ophiostoma piceae uamh
F503_04373
I
FFUJ_00821
Fusarium fujikuroi
FFUJ_00821
I
fgenesh1_pg.C_scaffold_12000199
Cochliobolus heterostrophus C5
fgenesh1_pg.C_scaffold_12000199
I
fgenesh3_pm.C_scaffold_10000323
Neurospora discreta
fgenesh3_pm.C_scaffold_10000323
I
FGRRES_00318
Fusarium graminearum
FGRRES_00318
I
FPSE_07692
Fusarium pseudograminearum
FPSE_07692
I
G647_03448
Cladophialophora carrionii
G647_03448
I
GGTG_12982
Gaeumannomyces graminis
GGTG_12982
I
GLRG_07358
Colletotrichum graminicola
GLRG_07358
I
GMDG_00077
Pseudogymnoascus destructans
GMDG_00077
I
gw1.2.720.1
Cryphonectria parasitica
gw1.2.720.1
I
gw1.2.915.1
Mycosphaerella graminicola
gw1.2.915.1
I
H101_04388
Trichophyton interdigitale
H101_04388
I
H102_02726
Trichophyton rubrum
H102_02726
I
H105_02744
Trichophyton soudanense
H105_02744
I
HCBG_07944
Histoplasma capsulatum
HCBG_07944
I
HMPREF1120_09254
Exophiala dermatitidis
HMPREF1120_09254
N
HMPREF1541_11021
Cyphellophora europaea
HMPREF1541_11021
N
HMPREF1624_03400
Sporothrix schenckii
HMPREF1624_03400
I
LEMA_P100750.1
Leptosphaeria maculans
LEMA_P100750.1
I
M437DRAFT_12002
Aureobasidium melanogenum
M437DRAFT_12002
I
M438DRAFT_283552
Aureobasidium pullulans
M438DRAFT_283552
I
MAC_06559
Metarhizium acridum
MAC_06559
I
MAJ_07299
Metarhizium majus
MAJ_07299
I
MAM_00987
Metarhizium album
MAM_00987
I
MANI_017733
Metarhizium anisopliae
MANI_017733
I
MAPG_08672
Magnaporthe poae
MAPG_08672
I
MBM_02301
Marssonina brunnea
MBM_02301
I
MBR_05142
Metarhizium brunneum
MBR_05142
I
MCYG_05302
Microsporum canis
MCYG_05302
I
MCYG_05302
Arthroderma otae
MCYG_05302
I
MGG_15357
Magnaporthe oryzae
MGG_15357
I
MGU_01530
Metarhizium guizhouense
MGU_01530
I
MGYG_06353
Microsporum gypseum
MGYG_06353
I
MYCFIDRAFT_150925
Pseudocercospora fijiensis
MYCFIDRAFT_150925
I
Mycgr3G18493
Zymoseptoria tritici
Mycgr3G18493
I
MYCTH_109046
Myceliophthora thermophila
MYCTH_109046
I
NCU01706
Neurospora crassa
NCU01706
D
NechaG75076
Fusarium solani
NechaG75076
I
NEUTE1DRAFT_101778
Neurospora tetrasperma
NEUTE1DRAFT_101778
I
OCS_06093
Ophiocordyceps sinensis
OCS_06093
I
Pc12g05270
Penicillium chrysogenum
Pc12g05270
I
PCH_Pc12g05270
Penicillium rubens
PCH_Pc12g05270
I
PDE_02360
Penicillium oxalicum
PDE_02360
I
PDIP_34590
Penicillium digitatum
PDIP_34590
I
PEX1_091250
Penicillium expansum
PEX1_091250
I
PITC_075220
Penicillium italicum
PITC_075220
I
PMAA_096140
Talaromyces marneffei
PMAA_096140
I
PMAA_096140
Penicillium marneffei
PMAA_096140
I
PODANS_3_6670
Podospora anserina
PODANS_3_6670
I
PTRG_03662
Pyrenophora triticirepentis
PTRG_03662
I
PTT_06541
Pyrenophora teres
PTT_06541
I
PV04_03970
Capronia semiimmersa
PV04_03970
N
PV05_06707
Exophiala xenobiotica
PV05_06707
N
PV10_03876
Exophiala mesophila
PV10_03876
I
PVAR5_6000
Byssochlamys spectabilis
PVAR5_6000
I
S40285_03377
Stachybotrys chlorohalonata
S40285_03377
I
S40288_05289
Stachybotrys chartarum
S40288_05289
I
SEPMUDRAFT_123869
Sphaerulina musiva
SEPMUDRAFT_123869
I
SETTUDRAFT_176508
Setosphaeria turcica
SETTUDRAFT_176508
I
SNOG_01243
Stagonospora nodorum
SNOG_01243
I
SNOG_01243
Phaeosphaeria nodorum
SNOG_01243
I
SPBR_01773
Sporothrix brasiliensis
SPBR_01773
I
SS1G_01859
Sclerotinia sclerotiorum
SS1G_01859
I
TEQG_06211
Trichophyton equinum
TEQG_06211
I
TESG_03699
Trichophyton tonsurans
TESG_03699
I
THITE_16965
Thielavia terrestris
THITE_16965
I
TRIATDRAFT_289913
Trichoderma atroviride
TRIATDRAFT_289913
I
TRIREDRAFT_1941
Trichoderma reesei
TRIREDRAFT_1941
I
TRV_05271
Trichophyton verrucosum
TRV_05271
I
TSTA_045180
Talaromyces stipitatus
TSTA_045180
I
TSTA_106970
Talaromyces stipitatus
TSTA_106970
I
U727_0043108001
Penicillium solitum
U727_0043108001
I
UCREL1_549
Eutypa lata
UCREL1_549
I
UV8b_756
Ustilaginoidea virens
UV8b_756
I
VDAG_06776
Verticillium dahliae
VDAG_06776
I
VHEMI03823
Torrubiella hemipterigena
VHEMI03823
I
W97_01044
Coniosporium apollinis
W97_01044
I
X797_006944
Metarhizium robertsii
X797_006944
I
Z519_06848
Cladophialophora bantiana
Z519_06848
I