ENSSSCG00000024404 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000024404 T110514_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.819 0.974
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.819 0.974
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.819 0.974
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.819 0.974
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.819 0.974
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.819 0.974
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.819 0.974
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.819 0.974
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.819 0.974
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.819 0.974
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.819 0.974
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.819 0.974
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.815 0.965
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000006685 C2H2 ZF 114 136
ENSSSCP00000006685 C2H2 ZF 145 167
ENSSSCP00000006685 C2H2 ZF 171 193
ENSSSCP00000006685 C2H2 ZF 199 221
ENSSSCP00000006685 C2H2 ZF 227 248

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB09078.1 Alternaria brassicicola AB09078.1 I 0.000
AFUA_6G05160 Aspergillus fumigatus CADAFUAG00000585 I 0.000
ATEG_05658 Aspergillus terreus CADATEAG00000806 I 0.000
AUEXF2481DRAFT_108778 Aureobasidium subglaciale AUEXF2481DRAFT_108778 I 0.000
COCC4DRAFT_163074 Bipolaris maydis COCC4DRAFT_163074 I 0.000
COCCADRAFT_104228 Bipolaris zeicola COCCADRAFT_104228 I 0.000
COCMIDRAFT_85681 Bipolaris oryzae COCMIDRAFT_85681 I 0.000
COCSADRAFT_136667 Bipolaris sorokiniana COCSADRAFT_136667 I 0.000
COCVIDRAFT_108803 Bipolaris victoriae COCVIDRAFT_108803 I 0.000
estExt_fgenesh1_pg.C_70029 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_70029 I 0.000
EV44_g5109 Erysiphe necator EV44_g5109 I 0.000
e_gw1.8.1357.1 Mycosphaerella graminicola e_gw1.8.1357.1 N 0.000
LEMA_P018870.1 Leptosphaeria maculans LEMA_P018870.1 I 0.000
M437DRAFT_9881 Aureobasidium melanogenum M437DRAFT_9881 I 0.000
M438DRAFT_281957 Aureobasidium pullulans M438DRAFT_281957 I 0.000
MPH_06655 Macrophomina phaseolina MPH_06655 I 0.000
Mycgr3G46610 Zymoseptoria tritici Mycgr3G46610 N 0.000
NFIA_051730 Neosartorya fischeri CADNFIAG00004445 I 0.000
PTRG_01131 Pyrenophora triticirepentis PTRG_01131 I 0.000
PTT_19009 Pyrenophora teres PTT_19009 I 0.000
PV09_00215 Verruconis gallopava PV09_00215 I 0.000
PVAR5_8036 Byssochlamys spectabilis PVAR5_8036 I 0.000
SETTUDRAFT_105303 Setosphaeria turcica SETTUDRAFT_105303 I 0.000
SNOG_09345 Stagonospora nodorum SNOG_09345 I 0.000
W97_05116 Coniosporium apollinis W97_05116 I 0.000