CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000013127
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000013127
T110757_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF75A
M02897_2.00
Homo sapiens
TGTGGGAAAASM
KSTTTTCCCACA
SELEX
Jolma et al.(2013)
ZNF75A_1
0.825
0.974
ZNF75A
M04503_2.00
Homo sapiens
NGVTTTTCCCACVN
NBGTGGGAAAABCN
SELEX
Yin et al.(2017)
ZNF75A_eDBD_HT-SELEX
0.825
0.974
ZNF75A
M04505_2.00
Homo sapiens
NGCTTTTCCCACAH
DTGTGGGAAAAGCN
SELEX
Yin et al.(2017)
ZNF75A_FL_HT-SELEX
0.825
0.974
ZNF75A
M04504_2.00
Homo sapiens
HGCTTTTCCCACVN
NBGTGGGAAAAGCD
SELEX
Yin et al.(2017)
ZNF75A_eDBD_Methyl-HT-SELEX
0.825
0.974
ZNF75A
M04506_2.00
Homo sapiens
NTGTGGGAAAAGCN
NGCTTTTCCCACAN
SELEX
Yin et al.(2017)
ZNF75A_FL_Methyl-HT-SELEX
0.825
0.974
ZNF75D
M07683_2.00
Homo sapiens
GTGGGAAABCCT
AGGVTTTCCCAC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF75D.RCADE.OriginalMapping
0.793
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000011765
C2H2 ZF
161
183
FKCQECGKNFRVSSDLIKHQRIH
ENSSTOP00000011765
C2H2 ZF
189
211
YKCQQCDKRFRWSSDLNKHLTTH
ENSSTOP00000011765
C2H2 ZF
217
239
YKCSWCGKSFSQNTNLHTHQRTH
ENSSTOP00000011765
C2H2 ZF
245
267
FTCHECGKKFSQNSHLIKHRRTH
ENSSTOP00000011765
C2H2 ZF
273
295
YTCGICKRNFSRRSSLLRHQKLH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy