ENSSTOG00000025878 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000025878 T110943_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp467
M10360_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EZI_06 		0.807 0.964
ZNF467
M08358_2.00 		Homo sapiens
CCCTCCCCCHCC
GGDGGGGGAGGG		 ChIP-seq
Schmitges et al.(2016)
Q7Z7K2_3-6.RCADE 		0.806 0.964
ZNF467
M08932_2.00 		Homo sapiens
YYYYYYYYYYYYYCYCCTCCCY
RGGGAGGRGRRRRRRRRRRRRR		 Misc
Kulakovskiy et al.(2013)
ZN467_HUMAN.H11MO.0.C 		0.806 0.964
ZNF467
M08260_2.00 		Homo sapiens
YYYCYYYYYYYBYCCCTCCCY
RGGGAGGGRVRRRRRRRGRRR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF467 		0.806 0.964
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000020564 C2H2 ZF 160 182
ENSSTOP00000020564 C2H2 ZF 188 210
ENSSTOP00000020564 C2H2 ZF 216 238
ENSSTOP00000020564 C2H2 ZF 244 266
ENSSTOP00000020564 C2H2 ZF 272 294
ENSSTOP00000020564 C2H2 ZF 300 322
ENSSTOP00000020564 C2H2 ZF 355 377
ENSSTOP00000020564 C2H2 ZF 436 458
ENSSTOP00000020564 C2H2 ZF 464 486
ENSSTOP00000020564 C2H2 ZF 492 514
ENSSTOP00000020564 C2H2 ZF 520 542
ENSSTOP00000020564 C2H2 ZF 548 570

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g196010 Brassica oleracea Bo4g196010 N 0.000
Bra039294 Brassica rapa Bra039294 N 0.000
BRADI3G27760 Brachypodium distachyon BRADI3G27760 N 0.000
F775_04400 Aegilops tauschii F775_04400 N 0.000
MLOC_12524 Hordeum vulgare MLOC_12524 N 0.000
MLOC_44613 Hordeum vulgare MLOC_44613 N 0.000
OB10G19040 Oryza brachyantha OB10G19040 N 0.000
OGLUM10G11470 Oryza glumaepatula OGLUM10G11470 N 0.000
OMERI10G08690 Oryza meridionalis OMERI10G08690 N 0.000
ONIVA10G10880 Oryza nivara ONIVA10G10880 N 0.000
OPUNC10G09980 Oryza punctata OPUNC10G09980 N 0.000
ORGLA10G0103300 Oryza glaberrima ORGLA10G0103300 N 0.000
ORUFI10G12220 Oryza rufipogon ORUFI10G12220 N 0.000
OS10G0446400 Oryza sativa OS10G0446400 N 0.000
Pavir.Ia01988 Panicum virgatum Pavir.Ia01988 N 0.000
Pavir.Ib03139 Panicum virgatum Pavir.Ib03139 N 0.000
Sb01g020470 Sorghum bicolor Sb01g020470 N 0.000
Si038535m.g Setaria italica Si038535m.g N 0.000
Thhalv10001382m.g Eutrema salsugineum Thhalv10001382m.g N 0.000
Traes_1AL_FD7448458 Triticum aestivum Traes_1AL_FD7448458 N 0.000
Traes_2AS_6F531FBB5 Triticum aestivum Traes_2AS_6F531FBB5 N 0.000
TRIUR3_17760 Triticum urartu TRIUR3_17760 N 0.000