SCRT2 (Taeniopygia guttata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTGUG00000006801 T111403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.790 0.885
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.790 0.885
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.790 0.885
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.790 0.885
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.788 0.850
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.788 0.850
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.788 0.850
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.788 0.850
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.785 0.841
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.785 0.841
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.785 0.841
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.784 0.885
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.784 0.885
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.784 0.885
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000006989 C2H2 ZF 87 109
ENSTGUP00000006989 C2H2 ZF 119 140
ENSTGUP00000006989 C2H2 ZF 144 166
ENSTGUP00000006989 C2H2 ZF 172 194
ENSTGUP00000006989 C2H2 ZF 200 221

Links

Other C2H2 ZF family TFs
Other Taeniopygia guttata TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_021050 Aspergillus clavatus CADACLAG00002292 I
AFUA_1G14360 Aspergillus fumigatus CADAFUAG00007111 I
ANIA_10120 Aspergillus nidulans CADANIAG00001891 D
ATEG_00638 Aspergillus terreus CADATEAG00009286 I
AUEXF2481DRAFT_183957 Aureobasidium subglaciale AUEXF2481DRAFT_183957 I
BDDG_03741 Blastomyces dermatitidis BDDG_03741 I
BGHDH14_bgh03978 Blumeria graminis BGHDH14_bgh03978 N
CADAFLAG00005530 Aspergillus flavus CADAFLAG00005530 I
CADANGAG00001240 Aspergillus niger CADANGAG00001240 I
CADAORAG00005134 Aspergillus oryzae CADAORAG00005134 I
CIMG_03190 Coccidioides immitis CIMG_03190 I
CNI01500 Cryptococcus neoformans CNI01500 N
DOTSEDRAFT_128825 Dothistroma septosporum DOTSEDRAFT_128825 N
EPUS_07650 Endocarpon pusillum EPUS_07650 I
estExt_Genewise1Plus.C_chr_31013 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_31013 N
EURHEDRAFT_447655 Aspergillus ruber EURHEDRAFT_447655 I
EV44_g5837 Erysiphe necator EV44_g5837 N
fgenesh1_pm.00042_#_235 Aspergillus carbonarius fgenesh1_pm.00042_#_235 I
gw1.6.805.1 Mycosphaerella graminicola gw1.6.805.1 I
HCBG_01404 Histoplasma capsulatum HCBG_01404 I
M437DRAFT_18298 Aureobasidium melanogenum M437DRAFT_18298 I
M438DRAFT_276450 Aureobasidium pullulans M438DRAFT_276450 I
MBM_04933 Marssonina brunnea MBM_04933 I
MYCFIDRAFT_107328 Pseudocercospora fijiensis MYCFIDRAFT_107328 N
MYCFIDRAFT_140661 Pseudocercospora fijiensis MYCFIDRAFT_140661 I
Mycgr3G21205 Zymoseptoria tritici Mycgr3G21205 I
Mycgr3G69836 Zymoseptoria tritici Mycgr3G69836 N
OIDMADRAFT_134351 Oidiodendron maius OIDMADRAFT_134351 N
PAAG_12029 Paracoccidioides sp lutzii PAAG_12029 I
Pc16g12950 Penicillium chrysogenum Pc16g12950 I
PCH_Pc16g12950 Penicillium rubens PCH_Pc16g12950 I
PDE_00300 Penicillium oxalicum PDE_00300 I
PDIP_66730 Penicillium digitatum PDIP_66730 I
PEX1_010850 Penicillium expansum PEX1_010850 I
PITC_091680 Penicillium italicum PITC_091680 I
PMAA_065570 Penicillium marneffei PMAA_065570 I
PMAA_065570 Talaromyces marneffei PMAA_065570 I
PVAR5_4079 Byssochlamys spectabilis PVAR5_4079 I
SEPMUDRAFT_63694 Sphaerulina musiva SEPMUDRAFT_63694 N
TSTA_085600 Talaromyces stipitatus TSTA_085600 I
U727_00432720241 Penicillium solitum U727_00432720241 I