CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN9
(
Tursiops truncatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTTRG00000013203
T113283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN9
M04465_2.00
Homo sapiens
NKGVTTCTTATCTTATCMYH
DRKGATAAGATAAGAABCMN
SELEX
Yin et al.(2017)
ZSCAN9_eDBD_HT-SELEX
0.790
0.896
ZSCAN9
M04466_2.00
Homo sapiens
NKGVTTCTTATCTTATCCYY
RRGGATAAGATAAGAABCMN
SELEX
Yin et al.(2017)
ZSCAN9_eDBD_Methyl-HT-SELEX
0.790
0.896
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000012520
C2H2 ZF
253
275
HRCEECGKSFAQSSGLVRHQRVH
ENSTTRP00000012520
C2H2 ZF
281
303
YECNECGKTFSRSSGLFNHRGIH
ENSTTRP00000012520
C2H2 ZF
309
331
YHCKECGKAFSQSAGLIQHQRIH
ENSTTRP00000012520
C2H2 ZF
337
359
YQCSQCNKSYGRRSFLIEHQRSH
ENSTTRP00000012520
C2H2 ZF
365
387
HHCNKCGKSFNRHCNLIRHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Tursiops truncatus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_15854
Aegilops tauschii
F775_15854
N
0.000
OPUNC03G38540
Oryza punctata
OPUNC03G38540
N
0.000
Traes_4AL_C73E7E6FB
Triticum aestivum
Traes_4AL_C73E7E6FB
N
0.000
Traes_5DL_EFD6D48C0
Triticum aestivum
Traes_5DL_EFD6D48C0
N
0.000