sob (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0004892 T114421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sob
M03674_2.00		 Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1		 (Direct) (Direct)
sob
M03675_2.00		 Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2		 (Direct) (Direct)
sob
M06088_2.00		 Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892		 (Direct) (Direct)
sob
M06089_2.00		 Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.814 0.957
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.814 0.957
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.814 0.957
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.795 0.896
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.795 0.896
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.795 0.896
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.795 0.896
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0077247 C2H2 ZF 395 417
FBpp0077247 C2H2 ZF 423 445
FBpp0077247 C2H2 ZF 451 473
FBpp0077247 C2H2 ZF 479 501
FBpp0077247 C2H2 ZF 507 529

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R014691 Aptenodytes forsteri Afo_R014691 N
Alligator_sinensis_CCG014704.1 Alligator sinensis Alligator_sinensis_CCG014704.1 N
Brh_R013849 Buceros rhinoceros Brh_R013849 N
Cmyd_10011645 Chelonia mydas Cmyd_10011645 N
ENSAMEG00000012484 Ailuropoda melanoleuca ENSAMEG00000012484 N
ENSAMXG00000014869 Astyanax mexicanus ENSAMXG00000014869 N
ENSAPLG00000012656 Anas platyrhynchos ENSAPLG00000012656 N
ENSBTAP00000023089-D1 Bos grunniens ENSBTAP00000023089-D1 N
ENSCSAG00000016763 Chlorocebus sabaeus ENSCSAG00000016763 N
ENSECAG00000020244 Equus caballus ENSECAG00000020244 N
ENSFALG00000001000 Ficedula albicollis ENSFALG00000001000 N
ENSGALG00000005287 Gallus gallus ENSGALG00000005287 N
ENSLOCG00000009647 Lepisosteus oculatus ENSLOCG00000009647 N
ENSMEUG00000013550 Macropus eugenii ENSMEUG00000013550 N
ENSMPUG00000011833 Mustela putorius furo ENSMPUG00000011833 N
ENSOARG00000003667 Ovis aries ENSOARG00000003667 N
ENSONIG00000005797 Oreochromis niloticus ENSONIG00000005797 N
ENSORLG00000009398 Oryzias latipes ENSORLG00000009398 N
ENSPANG00000008922 Papio anubis ENSPANG00000008922 N
ENSPFOG00000004330 Poecilia formosa ENSPFOG00000004330 N
ENSPPYG00000029781 Pongo abelii ENSPPYG00000029781 N
ENSPSIG00000018010 Pelodiscus sinensis ENSPSIG00000018010 N
ENSSHAG00000007698 Sarcophilus harrisii ENSSHAG00000007698 N
ENSSTOG00000003116 Ictidomys tridecemlineatus ENSSTOG00000003116 N
ENSXMAG00000009463 Xiphophorus maculatus ENSXMAG00000009463 N
Ogr00204 Ophisaurus gracilis Ogr00204 N
Zbtb47 Rattus norvegicus ENSRNOG00000019382 N
ZBTB47 Sus scrofa ENSSSCG00000030065 N
zbtb47 Xenopus tropicalis XB-GENE-992955 N
ZBTB47 Anolis carolinensis ENSACAG00000006705 N
ZBTB47 Oryctolagus cuniculus ENSOCUG00000020899 N
ZBTB47 Monodelphis domestica ENSMODG00000013582 N
ZBTB47 Meleagris gallopavo ENSMGAG00000002353 N
ZBTB47 Loxodonta africana ENSLAFG00000003570 N
ZBTB47 Gorilla gorilla ENSGGOG00000000433 N
ZBTB47 Homo sapiens ENSG00000114853 N
ZBTB47 Felis catus ENSFCAG00000000532 N
ZBTB47 Cavia porcellus ENSCPOG00000025338 N
ZBTB47 Callithrix jacchus ENSCJAG00000018096 N
ZBTB47 Canis familiaris ENSCAFG00000030889 N
ZBTB47 Bos taurus ENSBTAG00000017365 N
zbtb47a Danio rerio ENSDARG00000057751 N
zbtb47b Tetraodon nigroviridis ENSTNIG00000001401 N
zbtb47b Takifugu rubripes ENSTRUG00000017575 N
zbtb47b Danio rerio ENSDARG00000079547 N
Zfp651 Mus musculus ENSMUSG00000013419 N