CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GA17390 *(Drosophila pseudoobscura)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	FBgn0077403	T114713_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Kr M03663_2.00	Drosophila melanogaster	BTTAACCCTTTH	DAAAGGGTTAAV	SELEX Nitta et al.(2015) Kr_1	0.825	0.991
Kr M06047_2.00	Drosophila melanogaster	DTWACCCBTT	AAVGGGTWAH	B1H Zhu et al.(2011) Kr_FlyReg_FBgn0001325	0.825	0.991
Kr M06048_2.00	Drosophila melanogaster	TAACCCBTTNV	BNAAVGGGTTA	B1H Zhu et al.(2011) Kr_NAR_FBgn0001325	0.825	0.991
Kr M06049_2.00	Drosophila melanogaster	WACCCYTY	RARGGGTW	B1H Zhu et al.(2011) Kr_SANGER_5_FBgn0001325	0.825	0.991
Kr M08411_2.00	Drosophila melanogaster	NNYAACCCTTTBNN	NNVAAAGGGTTRNN	ChIP-chip Mathelier et al.(2014) MA0452.2	0.825	0.991
Kr M09661_2.00	Drosophila melanogaster	HWACCCKTTBN	NVAAMGGGTWD	Misc Kulakovskiy et al.(2009) Kr	0.825	0.991
Kr M10371_2.00	Drosophila melanogaster	WWAACCCRKT	AMYGGGTTAW	Transfac Matys et al.(2006) I$KR_01	0.825	0.991
Kr M10372_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$KR_Q6	0.825	0.991
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Drosophila pseudoobscura* TFs