CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr3G03850_001
(
Musa acuminata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GSMUA_Achr3G03850_001
T118686_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr3P03850_001
C2H2 ZF
243
264
FMCRKCGKAFAVKGDWRTHEKN
GSMUA_Achr3P03850_001
C2H2 ZF
263
289
KNCGKLWYCICGSDFKHKRSLKDHIKA
Links
Other
C2H2 ZF
family TFs
Other
Musa acuminata
TFs
268 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006953
Oryza indica
BGIOSGA006953
N
BGIOSGA019943
Oryza indica
BGIOSGA019943
N
MLOC_70503
Hordeum vulgare
MLOC_70503
N
OB0245G10010
Oryza brachyantha
OB0245G10010
N
OGLUM02G07340
Oryza glumaepatula
OGLUM02G07340
N
OGLUM05G19360
Oryza glumaepatula
OGLUM05G19360
N
OMERI05G15970
Oryza meridionalis
OMERI05G15970
N
ONIVA02G08940
Oryza nivara
ONIVA02G08940
N
ONIVA05G19190
Oryza nivara
ONIVA05G19190
N
OPUNC02G06490
Oryza punctata
OPUNC02G06490
N
OPUNC05G16080
Oryza punctata
OPUNC05G16080
N
PGSC0003DMG400030271
Solanum tuberosum
PGSC0003DMG400030271
N
0.797
PK07396.1
Cannabis sativa
PK07396.1
N
Solyc06g074360.2
Solanum lycopersicum
Solyc06g074360.2
N
Traes_5AL_78701B16C
Triticum aestivum
Traes_5AL_78701B16C
N
Traes_7AS_9671D35EF
Triticum aestivum
Traes_7AS_9671D35EF
N