GSMUA_Achr5G08730_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr5G08730_001 T118706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.784 0.652
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.782 0.848
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.766 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.766 0.783
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.763 0.826
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.759 0.652
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.759 0.630
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.757 0.761
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.757 0.761
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P08730_001 C2H2 ZF 82 104
GSMUA_Achr5P08730_001 C2H2 ZF 135 157

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008005 Aedes aegypti AAEL008005 N
ACEP23771 Atta cephalotes ACEP23771 N
GA17655 Drosophila pseudoobscura FBgn0077666 N
GB50960 Apis mellifera GB50960 N
GD14182 Drosophila simulans FBgn0185869 N
GE20840 Drosophila yakuba FBgn0238131 N
GF25133 Drosophila ananassae FBgn0102125 N
GG15376 Drosophila erecta FBgn0107628 N
GH15946 Drosophila grimshawi FBgn0123417 N
GI16598 Drosophila mojavensis FBgn0139346 N
GJ12850 Drosophila virilis FBgn0200085 N
GK17576 Drosophila willistoni FBgn0219575 N
GL17877 Drosophila persimilis FBgn0155480 N
LCUP008453 Lucilia cuprina LCUP008453 N
LDEC021755 Leptinotarsa decemlineata LDEC021755 N
LLOJ005404 Lutzomyia longipalpis LLOJ005404 N
MDOA009916 Musca domestica MDOA009916 N
MTF-1 Drosophila melanogaster FBgn0040305 N
NV16132 Nasonia vitripennis NV16132 N
PPAI003792 Phlebotomus papatasi PPAI003792 N