LotgiG89896 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG89896 T121865_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sr
M06072_2.00 		Drosophila melanogaster
HVMCGCCCMCVYMH
DKRBGKGGGCGKBD		 B1H
Zhu et al.(2011)
sr_SANGER_5_FBgn0003499 		0.820 0.928
sr
M06073_2.00 		Drosophila melanogaster
NNMCRCCCMCVHNN
NNDBGKGGGYGKNN		 B1H
Zhu et al.(2011)
sr_SOLEXA_5_FBgn0003499 		0.820 0.928
egrh-1
M00622_2.00 		Caenorhabditis elegans
CSCCCMCR
YGKGGGSG		 PBM
Narasimhan et al.(2015)
pTH9317 		0.800 0.899
Egr1
M01864_2.00 		Mus musculus
CCCMCGYNN
NNRCGKGGG		 PBM
Weirauch et al.(2014)
pTH5337 		0.793 0.855
Egr1
M00375_2.00 		Mus musculus
NCCYMCDNN
NNHGKRGGN		 PBM
Berger et al.(2006)
Zif268 		0.793 0.855
EGR1
M02883_2.00 		Homo sapiens
NMCGCCCMCGCANN
NNTGCGKGGGCGKN		 SELEX
Jolma et al.(2013)
EGR1_1 		0.793 0.855
EGR1
M02884_2.00 		Homo sapiens
HMCGCCCACGCAHW
WDTGCGTGGGCGKD		 SELEX
Jolma et al.(2013)
EGR1_2 		0.793 0.855
Egr1
M02932_2.00 		Mus musculus
HHMCGCCCMCBCAHHH
DDDTGVGKGGGCGKDD		 SELEX
Jolma et al.(2013)
Egr1_1 		0.793 0.855
EGR1
M04437_2.00 		Homo sapiens
NNCRCCCMCRCNN
NNGYGKGGGYGNN		 SELEX
Yin et al.(2017)
EGR1_eDBD_HT-SELEX 		0.793 0.855
Egr1
M05860_2.00 		Mus musculus
NNMCRCCCMCGCN
NGCGKGGGYGKNN		 SMiLE-seq
Isakova et al.(2017)
EGR1 		0.793 0.855
EGR1
M07927_2.00 		Homo sapiens
NVBNNNNBCCGCCCMCGCNB
VNGCGKGGGCGGVNNNNVBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_EGR1_HudsonAlpha 		0.793 0.855
EGR1
M07928_2.00 		Homo sapiens
BNCCGCCCMCGCNBB
VVNGCGKGGGCGGNV		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_EGR1_HudsonAlpha 		0.793 0.855
EGR1
M07929_2.00 		Homo sapiens
NNNNNNBNNCCRCCCMCGCN
NGCGKGGGYGGNNVNNNNNN		 ChIP-seq
Gerstein et al.(2012)
K562_EGR1_HudsonAlpha 		0.793 0.855
EGR1
M08882_2.00 		Homo sapiens
BHNCCDCCCMCDCHBNB
VNVDGHGKGGGHGGNDV		 Misc
Kulakovskiy et al.(2013)
EGR1_HUMAN.H11MO.0.A 		0.793 0.855
Egr1
M08996_2.00 		Mus musculus
YYCCRCCCMCGCNB
VNGCGKGGGYGGRR		 Misc
Kulakovskiy et al.(2013)
EGR1_MOUSE.H11MO.0.A 		0.793 0.855
EGR1
M09506_2.00 		Homo sapiens
CRCCCMCRCA
TGYGKGGGYG		 Misc
Heinz et al.(2010)
K562-Egr1_GSE32465 		0.793 0.855
EGR1
M10188_2.00 		Homo sapiens
MCGCCYACGCAW
WTGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR1_01 		0.793 0.855
EGR1
M10189_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_02 		0.793 0.855
EGR1
M10190_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_09 		0.793 0.855
EGR1
M10191_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_11 		0.793 0.855
EGR1
M10192_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_12 		0.793 0.855
EGR1
M10193_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_13 		0.793 0.855
EGR1
M10194_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_15 		0.793 0.855
EGR1
M10195_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q3 		0.793 0.855
EGR1
M10196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q6 		0.793 0.855
EGR1
M04438_2.00 		Homo sapiens
NHCDCCCMCNYNN
NNRNGKGGGHGDN		 SELEX
Yin et al.(2017)
EGR1_eDBD_Methyl-HT-SELEX 		0.793 0.855
Egr3
M00776_2.00 		Mus musculus
HHDCCCMCDN
NHGKGGGHDD		 PBM
Weirauch et al.(2013)
pTH2820 		0.786 0.812
EGR3
M02915_2.00 		Homo sapiens
NHMCGCCCMCGCAHN
NDTGCGKGGGCGKDN		 SELEX
Jolma et al.(2013)
EGR3_1 		0.786 0.812
Egr3
M02931_2.00 		Mus musculus
HMCGCCCACGCAHWN
NWDTGCGTGGGCGKD		 SELEX
Jolma et al.(2013)
Egr3_1 		0.786 0.812
EGR3
M04583_2.00 		Homo sapiens
HMCGCCCACGCRH
DYGCGTGGGCGKD		 SELEX
Yin et al.(2017)
EGR3_FL_HT-SELEX 		0.786 0.812
EGR3
M08349_2.00 		Homo sapiens
CDCCYCCDC
GHGGRGGHG		 ChIP-seq
Schmitges et al.(2016)
Q06889_1-3.RCADE 		0.786 0.812
EGR3
M10279_2.00 		Homo sapiens
MCGCCYACGCWN
NWGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR3_01 		0.786 0.812
EGR3
M10280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR3_Q3 		0.786 0.812
EGR3
M10281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR3_Q6 		0.786 0.812
EGR3
M04584_2.00 		Homo sapiens
NMCGCCCACGCRH
DYGCGTGGGCGKN		 SELEX
Yin et al.(2017)
EGR3_FL_Methyl-HT-SELEX 		0.786 0.812
EGR4
M02889_2.00 		Homo sapiens
NHMCGCCCACGCAHHN
NDDTGCGTGGGCGKDN		 SELEX
Jolma et al.(2013)
EGR4_1 		0.783 0.797
EGR4
M02890_2.00 		Homo sapiens
NHMCGCCCACGCAHWH
DWDTGCGTGGGCGKDN		 SELEX
Jolma et al.(2013)
EGR4_2 		0.783 0.797
EGR4
M04461_2.00 		Homo sapiens
HMCGCCCACGCAH
DTGCGTGGGCGKD		 SELEX
Yin et al.(2017)
EGR4_eDBD_HT-SELEX 		0.783 0.797
EGR4
M10216_2.00 		Homo sapiens
MCRCCCACGCAW
WTGCGTGGGYGK		 Transfac
Matys et al.(2006)
V$NGFIC_01 		0.783 0.797
EGR4
M04462_2.00 		Homo sapiens
HMCGCCCMCGCRH
DYGCGKGGGCGKD		 SELEX
Yin et al.(2017)
EGR4_eDBD_Methyl-HT-SELEX 		0.783 0.797
EGR2
M00233_2.00 		Homo sapiens
HDCCCMCDBN
NVHGKGGGHD		 PBM
Barrera et al.(2016)
EGR2_REF 		0.773 0.826
Egr2
M00778_2.00 		Mus musculus
YRCCCMCGYN
NRCGKGGGYR		 PBM
Weirauch et al.(2013)
pTH3091 		0.773 0.826
EGR2
M02885_2.00 		Homo sapiens
MCGCCCACGCD
HGCGTGGGCGK		 SELEX
Jolma et al.(2013)
EGR2_1 		0.773 0.826
EGR2
M02886_2.00 		Homo sapiens
NNMCGCCCACGCDNN
NNHGCGTGGGCGKNN		 SELEX
Jolma et al.(2013)
EGR2_2 		0.773 0.826
EGR2
M04439_2.00 		Homo sapiens
HMCRCCCACGCNN
NNGCGTGGGYGKD		 SELEX
Yin et al.(2017)
EGR2_FL_HT-SELEX 		0.773 0.826
EGR2
M08302_2.00 		Homo sapiens
CDCCCMCDC
GHGKGGGHG		 ChIP-seq
Schmitges et al.(2016)
P11161_1-3.RCADE 		0.773 0.826
EGR2
M08884_2.00 		Homo sapiens
YYCCDCCCMCDCHYHYHY
RDRDRDGHGKGGGHGGRR		 Misc
Kulakovskiy et al.(2013)
EGR2_HUMAN.H11MO.0.A 		0.773 0.826
Egr2
M08994_2.00 		Mus musculus
BHYCCDCCCMCDCN
NGHGKGGGHGGRDV		 Misc
Kulakovskiy et al.(2013)
EGR2_MOUSE.H11MO.0.A 		0.773 0.826
Egr2
M09515_2.00 		Mus musculus
NMCRCCCACDSN
NSHGTGGGYGKN		 Misc
Heinz et al.(2010)
Thymocytes-Egr2_GSE34254 		0.773 0.826
EGR2
M10197_2.00 		Homo sapiens
MCGCCYACGCAH
DTGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR2_01 		0.773 0.826
EGR2
M10198_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR2_Q4 		0.773 0.826
EGR2
M10199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR2_Q6 		0.773 0.826
EGR2
M04440_2.00 		Homo sapiens
NMCGCCCACRCRN
NYGYGTGGGCGKN		 SELEX
Yin et al.(2017)
EGR2_FL_Methyl-HT-SELEX 		0.773 0.826
EGR2
M00232_2.00 		Homo sapiens
NHMCGCCYNN
NNRGGCGKDN		 PBM
Barrera et al.(2016)
EGR2_R409W 		0.772 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP89896 C2H2 ZF 4 28
LotgiP89896 C2H2 ZF 34 56
LotgiP89896 C2H2 ZF 62 84

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

359 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02953 Capronia coronata A1O1_02953 I
A1O3_05076 Capronia epimyces A1O3_05076 I
A1O5_01401 Cladophialophora psammophila A1O5_01401 I
A1O7_08648 Cladophialophora yegresii A1O7_08648 I
AB00218.1 Alternaria brassicicola AB00218.1 I
ACLA_076150 Aspergillus clavatus CADACLAG00006696 I
ACRE_007430 Acremonium chrysogenum ACRE_007430 I
AFUA_2G17220 Aspergillus fumigatus CADAFUAG00004619 I
AOL_s00006g292 Arthrobotrys oligospora AOL_s00006g292 I
AUEXF2481DRAFT_6770 Aureobasidium subglaciale AUEXF2481DRAFT_6770 I
BAUCODRAFT_86213 Baudoinia compniacensis BAUCODRAFT_86213 I
BBA_03811 Beauveria bassiana BBA_03811 I
BGHDH14_bgh00206 Blumeria graminis BGHDH14_bgh00206 I
BN7_2345 Wickerhamomyces ciferrii BN7_2345 N
CADAFLAG00010295 Aspergillus flavus CADAFLAG00010295 I
CANTEDRAFT_133402 Candida tenuis CANTEDRAFT_133402 I
CaO19.10266 Candida albicans CaO19.10266 I
CaO19.2752 Candida albicans CaO19.2752 I
CCM_08024 Cordyceps militaris CCM_08024 I
CFIO01_07840 Colletotrichum fioriniae CFIO01_07840 I
CH063_04661 Colletotrichum higginsianum CH063_04661 I
CIMG_09396 Coccidioides immitis CIMG_09396 I
CLUG_01374 Candida lusitaniae CLUG_01374 I
CLUG_01374 Clavispora lusitaniae CLUG_01374 I
CLUG_04828 Candida lusitaniae CLUG_04828 I
CLUG_04828 Clavispora lusitaniae CLUG_04828 I
Cob_05419 Colletotrichum orbiculare Cob_05419 I
CORT_0E01530 Candida orthopsilosis CORT_0E01530 I
CPAG_03992 Candida parapsilosis CPAG_03992 I
CPC735_017710 Coccidioides posadasii CPC735_017710 I
CPUR_00983 Claviceps purpurea CPUR_00983 I
CSUB01_11387 Colletotrichum sublineola CSUB01_11387 I
CTHT_0071740 Chaetomium thermophilum CTHT_0071740 I
CTRG_00141 Candida tropicalis CTRG_00141 I
DEHA2E15928g Debaryomyces hansenii DEHA2E15928g I
DOTSEDRAFT_69682 Dothistroma septosporum DOTSEDRAFT_69682 I
DRE_00729 Drechslerella stenobrocha DRE_00729 I
EPUS_06075 Endocarpon pusillum EPUS_06075 I
estExt_Genewise1.C_170195 Neurospora discreta estExt_Genewise1.C_170195 I
estExt_Genewise1Plus.C_140693 Mycosphaerella fijiensis estExt_Genewise1Plus.C_140693 I
estExt_gwp_genewisePlus_worm.C_chr_1.20217 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_1.20217 I
EURHEDRAFT_453290 Aspergillus ruber EURHEDRAFT_453290 I
e_gw1.20.504.1 Nectria haematococca e_gw1.20.504.1 I
e_gww1.1.1.1414.1 Pichia stipitis e_gww1.1.1.1414.1 I
FGRRES_02743 Fusarium graminearum FGRRES_02743 I
FOXG_10299 Fusarium oxysporum FOXG_10299 I
FPSE_11115 Fusarium pseudograminearum FPSE_11115 I
FVEG_08948 Fusarium verticillioides FVEG_08948 I
G210_1021 Candida maltosa G210_1021 I
G647_07623 Cladophialophora carrionii G647_07623 I
GGTG_08988 Gaeumannomyces graminis GGTG_08988 I
GLRG_10519 Colletotrichum graminicola GLRG_10519 I
GNLVRS01_PISO0M20318g Millerozyma farinosa GNLVRS01_PISO0M20318g I
GNLVRS01_PISO0N20561g Millerozyma farinosa GNLVRS01_PISO0N20561g I
GSTUM_00010178001 Tuber melanosporum GSTUM_00010178001 I
H072_10443 Dactylellina haptotyla H072_10443 I
H101_06499 Trichophyton interdigitale H101_06499 I
H102_04056 Trichophyton rubrum H102_04056 I
H105_04085 Trichophyton soudanense H105_04085 I
HCBG_01536 Histoplasma capsulatum HCBG_01536 I
HMPREF1120_00931 Exophiala dermatitidis HMPREF1120_00931 I
HMPREF1541_09730 Cyphellophora europaea HMPREF1541_09730 I
HMPREF1624_05376 Sporothrix schenckii HMPREF1624_05376 I
HPODL_04926 Ogataea parapolymorpha HPODL_04926 I
KUCA_T00002767001 Kuraishia capsulata KUCA_T00002767001 I
LELG_03482 Lodderomyces elongisporus LELG_03482 I
LELG_04370 Lodderomyces elongisporus LELG_04370 I
LEMA_P078460.1 Leptosphaeria maculans LEMA_P078460.1 I
M437DRAFT_44413 Aureobasidium melanogenum M437DRAFT_44413 I
M438DRAFT_334709 Aureobasidium pullulans M438DRAFT_334709 I
MAC_01626 Metarhizium acridum MAC_01626 I
MAJ_02407 Metarhizium majus MAJ_02407 I
MAM_00201 Metarhizium album MAM_00201 I
MANI_015197 Metarhizium anisopliae MANI_015197 I
MAPG_11476 Magnaporthe poae MAPG_11476 I
MBM_01810 Marssonina brunnea MBM_01810 I
MBR_02792 Metarhizium brunneum MBR_02792 I
MCYG_03934 Microsporum canis MCYG_03934 I
MCYG_03934 Arthroderma otae MCYG_03934 I
MGG_08757 Magnaporthe oryzae MGG_08757 I
MGU_00220 Metarhizium guizhouense MGU_00220 I
MGYG_07717 Microsporum gypseum MGYG_07717 I
MYCFIDRAFT_59416 Pseudocercospora fijiensis MYCFIDRAFT_59416 I
MYCTH_2303382 Myceliophthora thermophila MYCTH_2303382 I
NCU09496 Neurospora crassa NCU09496 I
NechaG43113 Fusarium solani NechaG43113 I
NEUTE1DRAFT_80722 Neurospora tetrasperma NEUTE1DRAFT_80722 I
NFIA_092600 Neosartorya fischeri CADNFIAG00008096 I
OIDMADRAFT_40290 Oidiodendron maius OIDMADRAFT_40290 I
PAAG_05527 Paracoccidioides sp lutzii PAAG_05527 I
PABG_05027 Paracoccidioides brasiliensis PABG_05027 I
PAS_chr3_0554 Komagataella pastoris PAS_chr3_0554 I
PAS_chr4_0487 Komagataella pastoris PAS_chr4_0487 I
Pc21g19860 Penicillium chrysogenum Pc21g19860 I
PCH_Pc21g19860 Penicillium rubens PCH_Pc21g19860 I
PDE_07881 Penicillium oxalicum PDE_07881 I
PDIP_38500 Penicillium digitatum PDIP_38500 I
PEX1_028120 Penicillium expansum PEX1_028120 I
PFICI_05781 Pestalotiopsis fici PFICI_05781 I
PGUG_03195 Candida guilliermondii PGUG_03195 I
PGUG_03195 Meyerozyma guilliermondii PGUG_03195 I
PICST_51364 Scheffersomyces stipitis PICST_51364 I
PICST_80960 Scheffersomyces stipitis PICST_80960 I
PITC_000810 Penicillium italicum PITC_000810 I
PODANS_7_1460 Podospora anserina PODANS_7_1460 I
PTRG_09820 Pyrenophora triticirepentis PTRG_09820 I
PV04_09226 Capronia semiimmersa PV04_09226 I
PV07_00527 Cladophialophora immunda PV07_00527 I
PV08_09225 Exophiala spinifera PV08_09225 I
PV09_08170 Verruconis gallopava PV09_08170 I
PV10_05123 Exophiala mesophila PV10_05123 I
PV11_02934 Exophiala sideris PV11_02934 I
PVAR5_7748 Byssochlamys spectabilis PVAR5_7748 I
rst2 Schizosaccharomyces pombe SPAC6F12.02 D
S40285_06430 Stachybotrys chlorohalonata S40285_06430 I
S40288_04249 Stachybotrys chartarum S40288_04249 I
SAPIO_CDS2067 Scedosporium apiospermum SAPIO_CDS2067 I
SEPMUDRAFT_147395 Sphaerulina musiva SEPMUDRAFT_147395 I
SMAC_07883 Sordaria macrospora SMAC_07883 I
SOCG_02266 Schizosaccharomyces octosporus SOCG_02266 I
SPAPADRAFT_153689 Spathaspora passalidarum SPAPADRAFT_153689 I
SPBR_04561 Sporothrix brasiliensis SPBR_04561 I
SPOG_00558 Schizosaccharomyces cryophilus SPOG_00558 I
TDEL_0F05500 Torulaspora delbrueckii TDEL_0F05500 N
TEQG_03348 Trichophyton equinum TEQG_03348 I
TESG_04883 Trichophyton tonsurans TESG_04883 I
THITE_2120332 Thielavia terrestris THITE_2120332 I
TRIATDRAFT_283087 Trichoderma atroviride TRIATDRAFT_283087 I
TRIREDRAFT_58897 Trichoderma reesei TRIREDRAFT_58897 I
TRIVIDRAFT_213523 Trichoderma virens TRIVIDRAFT_213523 I
TRV_02713 Trichophyton verrucosum TRV_02713 I
U727_00433330511 Penicillium solitum U727_00433330511 I
UREG_04917 Uncinocarpus reesii UREG_04917 I
UV8b_6591 Ustilaginoidea virens UV8b_6591 I
VDAG_09618 Verticillium dahliae VDAG_09618 I
VHEMI08775 Torrubiella hemipterigena VHEMI08775 I
W97_08313 Coniosporium apollinis W97_08313 I
X797_000845 Metarhizium robertsii X797_000845 I
XP_002492783.1 Pichia pastoris XP_002492783.1 I
XP_002493922.1 Pichia pastoris XP_002493922.1 I
YALI0_D18678g Yarrowia lipolytica YALI0_D18678g I
Z517_01468 Fonsecaea pedrosoi Z517_01468 I
Z518_02984 Rhinocladiella mackenziei Z518_02984 I
Z519_11866 Cladophialophora bantiana Z519_11866 I