MESCA009141 (Megaselia scalaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MESCA009141 T123252_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
odd
M03667_2.00
Drosophila melanogaster
WGCTACCGGTAGCH

DGCTACCGGTAGCW
SELEX
Nitta et al.(2015)
odd_1
0.770 0.902
odd
M06467_2.00
Drosophila melanogaster
BTGCTACTGKD

HMCAGTAGCAV
B1H
Mathelier et al.(2014)
MA0454.1
0.770 0.902
odd
M06058_2.00
Drosophila melanogaster
BTGCTACTGKD

HMCAGTAGCAV
B1H
Zhu et al.(2011)
odd_NAR_FBgn0002985
0.770 0.902
odd
M06059_2.00
Drosophila melanogaster
GCTWCYGDW

WHCRGWAGC
B1H
Zhu et al.(2011)
odd_NBT_1.5_FBgn0002985
0.770 0.902
odd
M06060_2.00
Drosophila melanogaster
GCTACYGKD

HMCRGTAGC
B1H
Zhu et al.(2011)
odd_NBT_2.5_FBgn0002985
0.770 0.902
odd
M06061_2.00
Drosophila melanogaster
GCTACTGKD

HMCAGTAGC
B1H
Zhu et al.(2011)
odd_NBT_5_FBgn0002985
0.770 0.902
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MESCA009141-PA C2H2 ZF 30 52
MESCA009141-PA C2H2 ZF 58 80
MESCA009141-PA C2H2 ZF 86 108
MESCA009141-PA C2H2 ZF 114 136

Links

Other C2H2 ZF family TFs
Other Megaselia scalaris TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA003306 Oryza indica BGIOSGA003306 I
cassava7885.valid.m1 Manihot esculenta cassava7885.valid.m1 I
cassava7886.valid.m1 Manihot esculenta cassava7886.valid.m1 I
GRMZM2G092694 Zea mays GRMZM2G092694 I
MTR_5g044695 Medicago truncatula MTR_5g044695 I
MTR_6g038890 Medicago truncatula MTR_6g038890 I
OB05G12510 Oryza brachyantha OB05G12510 I
OGLUM01G13550 Oryza glumaepatula OGLUM01G13550 I
OLONG_008759 Oryza longistaminata OLONG_008759 I
OLONG_024169 Oryza longistaminata OLONG_024169 I
Pavir.Ea01024 Panicum virgatum Pavir.Ea01024 I
PDK_20s1387052g001 Phoenix dactylifera PDK_20s1387052g001 I
PGSC0003DMG400016441 Solanum tuberosum PGSC0003DMG400016441 I
PGSC0003DMG400022063 Solanum tuberosum PGSC0003DMG400022063 I