MLOC_76196 (Hordeum vulgare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MLOC_76196 T123620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.760 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.760 0.761
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.759 0.717
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.759 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_76196.1 C2H2 ZF 43 70
MLOC_76196.1 C2H2 ZF 97 119

Links

Other C2H2 ZF family TFs
Other Hordeum vulgare TFs

322 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g082820 Brassica oleracea Bo8g082820 N
Bo8g082840 Brassica oleracea Bo8g082840 N
BRADI3G07987 Brachypodium distachyon BRADI3G07987 N
F775_12196 Aegilops tauschii F775_12196 N
mgf021292m Mimulus guttatus mgf021292m N
MLOC_77437 Hordeum vulgare MLOC_77437 N
OB05G10170 Oryza brachyantha OB05G10170 N
OBART01G20650 Oryza barthii OBART01G20650 N
OGLUM01G24300 Oryza glumaepatula OGLUM01G24300 N
OLONG_021595 Oryza longistaminata OLONG_021595 N
ONIVA01G23240 Oryza nivara ONIVA01G23240 N
ORUFI01G23320 Oryza rufipogon ORUFI01G23320 N
Thhalv10010289m.g Eutrema salsugineum Thhalv10010289m.g N
Traes_7AL_ED205638C Triticum aestivum Traes_7AL_ED205638C N
Traes_7DL_2B62A6D74 Triticum aestivum Traes_7DL_2B62A6D74 N
TRIUR3_11795 Triticum urartu TRIUR3_11795 N