CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART03G03980
(
Oryza barthii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OBART03G03980
T124627_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART03G03980.1
C2H2 ZF
1368
1391
FQCDIEFCDMTFETKAELRAHQRN
OBART03G03980.1
C2H2 ZF
1392
1415
ICTDESCGKRFSSHKYLKRHQCVH
OBART03G03980.1
C2H2 ZF
1421
1445
FKCPWDGCPMTFKWLWAQTEHIRVH
OBART03G03980.1
C2H2 ZF
1451
1477
YKCSAPDCGQSFRYVSDYSRHRKKFNH
OBART03G03980.2
C2H2 ZF
1340
1363
FQCDIEFCDMTFETKAELRAHQRN
OBART03G03980.2
C2H2 ZF
1364
1387
ICTDESCGKRFSSHKYLKRHQCVH
OBART03G03980.2
C2H2 ZF
1393
1417
FKCPWDGCPMTFKWLWAQTEHIRVH
OBART03G03980.2
C2H2 ZF
1423
1449
YKCSAPDCGQSFRYVSDYSRHRKKFNH
Links
Other
C2H2 ZF
family TFs
Other
Oryza barthii
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_3262
Colletotrichum gloeosporioides
CGGC5_3262
N
PV07_12062
Cladophialophora immunda
PV07_12062
N
PVAR5_5155
Byssochlamys spectabilis
PVAR5_5155
N
Z519_05209
Cladophialophora bantiana
Z519_05209
N