OGLUM01G40530 (Oryza glumaepatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OGLUM01G40530 T124704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.780 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.779 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.779 0.761
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.769 0.696
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.769 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.759 0.674
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.758 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM01G40530.1 C2H2 ZF 43 65
OGLUM01G40530.1 C2H2 ZF 92 114

Links

Other C2H2 ZF family TFs
Other Oryza glumaepatula TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006507 Ailuropoda melanoleuca ENSAMEG00000006507 I 0.000
ENSCSAG00000016599 Chlorocebus sabaeus ENSCSAG00000016599 I 0.000
ENSMMUP00000008515 Macaca fascicularis ENSMMUP00000008515 I 0.000
ENSMPUG00000000156 Mustela putorius furo ENSMPUG00000000156 I 0.000
ENSNLEG00000014346 Nomascus leucogenys ENSNLEG00000014346 I 0.000
ENSOARG00000019679 Ovis aries ENSOARG00000019679 I 0.000
ENSP00000354206-D1 Bos grunniens ENSP00000354206-D1 I 0.000
ENSPANG00000007539 Papio anubis ENSPANG00000007539 I 0.000
ENSPPYG00000005590 Pongo abelii ENSPPYG00000005590 I 0.000
ENSSTOG00000024495 Ictidomys tridecemlineatus ENSSTOG00000024495 I 0.000
Myotis_brandtii_ZNF219_10005327 Myotis brandtii Myotis_brandtii_ZNF219_10005327 I 0.000
Zfp219 Mus musculus ENSMUSG00000049295 I 0.000
Zfp219 Rattus norvegicus ENSRNOG00000011544 I 0.000
ZNF219 Macaca mulatta ENSMMUG00000006461 I 0.000
ZNF219 Myotis lucifugus ENSMLUG00000006987 I 0.000
ZNF219 Loxodonta africana ENSLAFG00000007094 I 0.000
ZNF219 Gorilla gorilla ENSGGOG00000007177 I 0.000
ZNF219 Oryctolagus cuniculus ENSOCUG00000009922 I 0.000
ZNF219 Otolemur garnettii ENSOGAG00000027894 I 0.000
ZNF219 Ochotona princeps ENSOPRG00000004914 I 0.000
ZNF219 Homo sapiens ENSG00000165804 D 0.000
ZNF219 Felis catus ENSFCAG00000014887 I 0.000
ZNF219 Equus caballus ENSECAG00000013524 I 0.000
ZNF219 Dasypus novemcinctus ENSDNOG00000019970 I 0.000
ZNF219 Tursiops truncatus ENSTTRG00000004281 I 0.000
ZNF219 Cavia porcellus ENSCPOG00000022085 I 0.000
ZNF219 Callithrix jacchus ENSCJAG00000009382 I 0.000
ZNF219 Bos taurus ENSBTAG00000021008 I 0.000