CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC09G10740
(
Oryza punctata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OPUNC09G10740
T125050_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SGR5
M06805_2.00
Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW
Dap-seq
OMalley et al.(2016)
SGR5_col_a
0.759
0.864
SGR5
M06806_2.00
Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW
Dap-seq
OMalley et al.(2016)
SGR5_colamp_a
0.759
0.864
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC09G10740.1
C2H2 ZF
186
213
WACARCSKAYAVHSDYKAHLKTCGTRGH
OPUNC09G10740.1
C2H2 ZF
207
233
TCGTRGHSCDCGRVFSRVESFIEHQDT
Links
Other
C2H2 ZF
family TFs
Other
Oryza punctata
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GMDG_01379
Pseudogymnoascus destructans
GMDG_01379
N
0.000
MGG_03319
Magnaporthe oryzae
MGG_03319
N
0.000