CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAXRUDRAFT_62501
(
Paxillus rubicundulus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PAXRUDRAFT_62501
T125486_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110420
M01458_2.00
Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10238
0.778
0.860
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK99062
C2H2 ZF
3
25
FSCDLCALSFNRQHDLKRHRETH
KIK99062
C2H2 ZF
31
51
FLCNGGCGKTFTRKDALKRHQ
Links
Other
C2H2 ZF
family TFs
Other
Paxillus rubicundulus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL008696
Aedes aegypti
AAEL008696
N
GA15332
Drosophila pseudoobscura
FBgn0075352
N
GD24642
Drosophila simulans
FBgn0195970
N
GE17479
Drosophila yakuba
FBgn0234944
N
GF20979
Drosophila ananassae
FBgn0097984
N
GG17985
Drosophila erecta
FBgn0110203
N
GH24864
Drosophila grimshawi
FBgn0132319
N
GI14415
Drosophila mojavensis
FBgn0137167
N
GK24988
Drosophila willistoni
FBgn0226947
N
GL20193
Drosophila persimilis
FBgn0157788
N
GM11208
Drosophila sechellia
FBgn0166153
N
LCUP004671
Lucilia cuprina
LCUP004671
N
MDOA010892
Musca domestica
MDOA010892
N
Smox
Drosophila melanogaster
FBgn0025800
N