PHUM474180 (Pediculus humanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PHUM474180 T126216_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.802 0.938
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.802 0.938
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.802 0.938
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.802 0.938
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.783 0.848
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.783 0.848
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.783 0.848
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.783 0.848
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.776 0.902
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.776 0.902
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.776 0.902
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.774 0.848
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.774 0.848
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.774 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PHUM474180-PA C2H2 ZF 233 255
PHUM474180-PA C2H2 ZF 264 286
PHUM474180-PA C2H2 ZF 292 312
PHUM474180-PA C2H2 ZF 318 340
PHUM474180-PA C2H2 ZF 346 367

Links

Other C2H2 ZF family TFs
Other Pediculus humanus TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CTRG_01280 Candida tropicalis CTRG_01280 N
DEHA2B04070g Debaryomyces hansenii DEHA2B04070g N
G210_2898 Candida maltosa G210_2898 N
GNLVRS01_PISO0A07920g Millerozyma farinosa GNLVRS01_PISO0A07920g N
GNLVRS01_PISO0B07987g Millerozyma farinosa GNLVRS01_PISO0B07987g N
KLTH0E08778g Lachancea thermotolerans KLTH0E08778g N
KLTH0E08778g Kluyveromyces thermotolerans KLTH0E08778g N
KUCA_T00003965001 Kuraishia capsulata KUCA_T00003965001 N
Kwal_17681 Kluyveromyces waltii Kwal_17681 N
LALA0_S02e05402g Lachancea lanzarotensis LALA0_S02e05402g N
PAS_chr1-3_0274 Komagataella pastoris PAS_chr1-3_0274 N
XP_002489620.1 Pichia pastoris XP_002489620.1 N