POPTR_0007s08920 (Populus trichocarpa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 POPTR_0007s08920 T126814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT4G35610
M00859_2.00
Arabidopsis thaliana
NNBHAGCTDNN

NNHAGCTDVNN
PBM
Franco-Zorrilla et al.(2014)
At4g35610
0.757 0.773
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0007s08920.1 C2H2 ZF 142 163

Links

Other C2H2 ZF family TFs
Other Populus trichocarpa TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R008279 Calypte anna Aan_R008279 I
Afo_R009036 Aptenodytes forsteri Afo_R009036 I
ANHX Canis familiaris ENSCAFG00000005892 I
ANHX Otolemur garnettii ENSOGAG00000026442 I
ANHX Oryctolagus cuniculus ENSOCUG00000024082 I
ANHX Macaca mulatta ENSMMUG00000001259 I
ANHX Myotis lucifugus ENSMLUG00000022300 I
ANHX Gorilla gorilla ENSGGOG00000024900 I
ANHX Felis catus ENSFCAG00000030622 I
ANHX Dasypus novemcinctus ENSDNOG00000037821 I
ANHX Homo sapiens ENSG00000227059 D
ANHX Bos taurus ENSBTAG00000026626 I
Brh_R008652 Buceros rhinoceros Brh_R008652 I
ENSBTAP00000037738-D1 Bos grunniens ENSBTAP00000037738-D1 I
ENSCJAG00000002388 Callithrix jacchus ENSCJAG00000002388 I
ENSCSAG00000001805 Chlorocebus sabaeus ENSCSAG00000001805 I
ENSFALG00000007397 Ficedula albicollis ENSFALG00000007397 I
ENSLAFG00000028773 Loxodonta africana ENSLAFG00000028773 I
ENSOARG00000008922 Ovis aries ENSOARG00000008922 I
ENSP00000409950 Macaca fascicularis ENSP00000409950 I
ENSPANG00000016069 Papio anubis ENSPANG00000016069 I
ENSPSIG00000013281 Pelodiscus sinensis ENSPSIG00000013281 I
ENSTGUG00000009899 Taeniopygia guttata ENSTGUG00000009899 I
Gfo_R010890 Geospiza fortis Gfo_R010890 I
Myotis_brandtii_ceh_10005230 Myotis brandtii Myotis_brandtii_ceh_10005230 I
Ogr14831 Ophisaurus gracilis Ogr14831 I
Tal_R010403 Tyto alba Tal_R010403 I