PRUPE_ppa004510mg (Prunus persica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PRUPE_ppa004510mg T127143_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.827 0.956
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.827 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ02167 C2H2 ZF 362 384
EMJ02167 C2H2 ZF 383 414

Links

Other C2H2 ZF family TFs
Other Prunus persica TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.000
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.000
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.000
Bo01002s040 Brassica oleracea Bo01002s040 I 0.000
Bo2g095820 Brassica oleracea Bo2g095820 I 0.000
Bo5g068250 Brassica oleracea Bo5g068250 I 0.000
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.000
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.000
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.000
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.000
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.000
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.000
Bra002421 Brassica rapa Bra002421 I 0.000
Bra008454 Brassica rapa Bra008454 I 0.000
Bra008456 Brassica rapa Bra008456 I 0.000
Bra008459 Brassica rapa Bra008459 I 0.000
Bra020196 Brassica rapa Bra020196 I 0.000
Bra020197 Brassica rapa Bra020197 I 0.000
Bra023211 Brassica rapa Bra023211 I 0.000
Bra028918 Brassica rapa Bra028918 I 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.000
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.000
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.000
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.000
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.000
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.000
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.000
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.000
Ca_18932 Cicer arietinum Ca_18932 I 0.000
Cla018337 Citrullus lanatus Cla018337 I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
F775_24185 Aegilops tauschii F775_24185 I 0.000
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.000
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.000
mgf002542m Mimulus guttatus mgf002542m I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.000
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.000
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.000
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.000
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.000
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.000
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.000
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.000
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.000
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.000
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.000
OS05G0478400 Oryza sativa OS05G0478400 I 0.000
OS05G0478800 Oryza sativa OS05G0478800 I 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.000
Pm003013 Prunus mume Pm003013 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
Si025181m.g Setaria italica Si025181m.g I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.000
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.000
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.000
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
WRKY62 Arabidopsis thaliana AT5G01900 D 0.000
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.000
WRKY63 Arabidopsis thaliana AT1G66600 D 0.000
WRKY64 Arabidopsis thaliana AT1G66560 I 0.000
WRKY66 Arabidopsis thaliana AT1G80590 I 0.000
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.000
WRKY67 Arabidopsis thaliana AT1G66550 I 0.000