CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PTT_06877
(
Pyrenophora teres
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PTT_06877
T127252_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
msn-1
M01192_2.00
Neurospora crassa
VCCCCTDW
WHAGGGGB
PBM
Lambert et al.(2019)
pTH8923
0.781
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFQ95218
C2H2 ZF
430
453
FVCTLCSRRFRRQEHLKRHYRSLH
EFQ95218
C2H2 ZF
459
481
FECTDCGKKFSRSDNLSQHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Pyrenophora teres
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA020501
Oryza indica
BGIOSGA020501
I
0.000
OBART06G28140
Oryza barthii
OBART06G28140
I
0.000
OGLUM06G29530
Oryza glumaepatula
OGLUM06G29530
I
0.000
OLONG_007470
Oryza longistaminata
OLONG_007470
I
0.000
OMERI06G28070
Oryza meridionalis
OMERI06G28070
I
0.000
ONIVA06G31120
Oryza nivara
ONIVA06G31120
I
0.000