CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PV09_03275
(
Verruconis gallopava
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV09_03275
T127614_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05285
M01885_2.00
Neurospora crassa
NNNVYCCRC
GYGGRBNNN
PBM
Weirauch et al.(2014)
pTH8892
0.788
0.889
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW06107
C2H2 ZF
180
202
FPCPHCTKTYLHAKHLKRHMLRH
KIW06107
C2H2 ZF
208
229
YQCKLCKDTFSRSDILKRHFQK
Links
Other
C2H2 ZF
family TFs
Other
Verruconis gallopava
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB09465.1
Alternaria brassicicola
AB09465.1
N
COCC4DRAFT_43193
Bipolaris maydis
COCC4DRAFT_43193
N
COCCADRAFT_1766
Bipolaris zeicola
COCCADRAFT_1766
N
COCMIDRAFT_103184
Bipolaris oryzae
COCMIDRAFT_103184
N
COCSADRAFT_296613
Bipolaris sorokiniana
COCSADRAFT_296613
N
COCVIDRAFT_36056
Bipolaris victoriae
COCVIDRAFT_36056
N
LEMA_P006030.1
Leptosphaeria maculans
LEMA_P006030.1
N
MPH_05075
Macrophomina phaseolina
MPH_05075
N
PTRG_11663
Pyrenophora triticirepentis
PTRG_11663
N
PTT_01962
Pyrenophora teres
PTT_01962
N
SETTUDRAFT_137903
Setosphaeria turcica
SETTUDRAFT_137903
N
SNOG_03067
Stagonospora nodorum
SNOG_03067
N
W97_07424
Coniosporium apollinis
W97_07424
N