SMAR015659 (Strigamia maritima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SMAR015659 T129178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF76
M04398_2.00 		Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX 		0.770 0.839
ZNF76
M08278_2.00 		Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV		 ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE 		0.770 0.839
ZNF76
M08856_2.00 		Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT		 Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C 		0.770 0.839
ZNF76
M04399_2.00 		Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX 		0.770 0.839
Zfp143
M09010_2.00 		Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A 		0.769 0.832
ZNF143
M02899_2.00 		Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR		 SELEX
Jolma et al.(2013)
ZNF143_1 		0.769 0.826
ZNF143
M07931_2.00 		Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford 		0.769 0.826
ZNF143
M08910_2.00 		Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A 		0.769 0.826
ZNF143
M09510_2.00 		Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN		 Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600 		0.769 0.826
ZNF143
M10247_2.00 		Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN		 Transfac
Matys et al.(2006)
V$STAF_01 		0.769 0.826
ZNF143
M10248_2.00 		Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK		 Transfac
Matys et al.(2006)
V$STAF_02 		0.769 0.826
ZNF143
M10249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAF_Q4_01 		0.769 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR015659-PA C2H2 ZF 181 205
SMAR015659-PA C2H2 ZF 211 235
SMAR015659-PA C2H2 ZF 241 265
SMAR015659-PA C2H2 ZF 271 295
SMAR015659-PA C2H2 ZF 301 325
SMAR015659-PA C2H2 ZF 331 355
SMAR015659-PA C2H2 ZF 361 384

Links

Other C2H2 ZF family TFs
Other Strigamia maritima TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016711 Ailuropoda melanoleuca ENSAMEG00000016711 I
ENSBTAP00000032740-D1 Bos grunniens ENSBTAP00000032740-D1 I
ENSCSAG00000013717 Chlorocebus sabaeus ENSCSAG00000013717 I
ENSMPUG00000013847 Mustela putorius furo ENSMPUG00000013847 I
ENSNLEG00000017444 Nomascus leucogenys ENSNLEG00000017444 I
ENSOARG00000012092 Ovis aries ENSOARG00000012092 I
ENSP00000362446 Macaca fascicularis ENSP00000362446 I
ENSPANG00000024822 Papio anubis ENSPANG00000024822 I
ENSPPYG00000019621 Pongo abelii ENSPPYG00000019621 I
ZNF79 Procavia capensis ENSPCAG00000007422 I
ZNF79 Bos taurus ENSBTAG00000023885 I
ZNF79 Canis familiaris ENSCAFG00000031097 I
ZNF79 Vicugna pacos ENSVPAG00000005120 I
ZNF79 Tursiops truncatus ENSTTRG00000015699 I
ZNF79 Tupaia belangeri ENSTBEG00000005767 I
ZNF79 Sus scrofa ENSSSCG00000005611 I
ZNF79 Pteropus vampyrus ENSPVAG00000000923 I
ZNF79 Pan troglodytes ENSPTRG00000021388 I
ZNF79 Equus caballus ENSECAG00000009109 I
ZNF79 Otolemur garnettii ENSOGAG00000000595 I
ZNF79 Choloepus hoffmanni ENSCHOG00000006736 I
ZNF79 Callithrix jacchus ENSCJAG00000018073 I
ZNF79 Dasypus novemcinctus ENSDNOG00000047558 I
ZNF79 Monodelphis domestica ENSMODG00000011141 I
ZNF79 Microcebus murinus ENSMICG00000002323 I
ZNF79 Gorilla gorilla ENSGGOG00000000647 I
ZNF79 Homo sapiens ENSG00000196152 D