Smp_144540 (Schistosoma mansoni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Smp_144540 T129233_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.761 0.826
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.761 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_144540.1:pep C2H2 ZF 78 100
Smp_144540.1:pep C2H2 ZF 106 128
Smp_144540.1:pep C2H2 ZF 134 156
Smp_144540.1:pep C2H2 ZF 162 184
Smp_144540.1:pep C2H2 ZF 190 212
Smp_144540.1:pep C2H2 ZF 218 241

Links

Other C2H2 ZF family TFs
Other Schistosoma mansoni TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000012675 Astyanax mexicanus ENSAMXG00000012675 I 0.000
ENSAMXG00000017435 Astyanax mexicanus ENSAMXG00000017435 N 0.000
ENSGMOG00000016301 Gadus morhua ENSGMOG00000016301 N 0.000
ENSLOCG00000012423 Lepisosteus oculatus ENSLOCG00000012423 N 0.000
ENSONIG00000005773 Oreochromis niloticus ENSONIG00000005773 N 0.000
ENSONIG00000012071 Oreochromis niloticus ENSONIG00000012071 N 0.000
ENSPFOG00000017744 Poecilia formosa ENSPFOG00000017744 I 0.000
max Danio rerio ENSDARG00000024844 I 0.000
MAX Gasterosteus aculeatus ENSGACG00000005981 N 0.000
max Oryzias latipes ENSORLG00000019517 N 0.000