Solyc11g073060.1 (Solanum lycopersicum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Solyc11g073060.1 T129397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.775 0.739
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.775 0.739
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.767 0.761
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.762 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.761 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.761 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g073060.1.1 C2H2 ZF 36 58
Solyc11g073060.1.1 C2H2 ZF 75 97

Links

Other C2H2 ZF family TFs
Other Solanum lycopersicum TFs

367 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R006000 Aptenodytes forsteri Afo_R006000 I 0.000
Brh_R010409 Buceros rhinoceros Brh_R010409 I 0.000
Cmyd_10020724 Chelonia mydas Cmyd_10020724 I 0.000
ENSAMEG00000002077 Ailuropoda melanoleuca ENSAMEG00000002077 I 0.000
ENSAMXG00000002922 Astyanax mexicanus ENSAMXG00000002922 I 0.000
ENSAPLG00000010379 Anas platyrhynchos ENSAPLG00000010379 I 0.000
ENSCHOG00000005539 Choloepus hoffmanni ENSCHOG00000005539 I 0.000
ENSCHOG00000009417 Choloepus hoffmanni ENSCHOG00000009417 I 0.000
ENSDNOG00000000774 Dasypus novemcinctus ENSDNOG00000000774 I 0.000
ENSGGOG00000023767 Gorilla gorilla ENSGGOG00000023767 I 0.000
ENSGMOG00000010245 Gadus morhua ENSGMOG00000010245 I 0.000
ENSMEUG00000011765 Macropus eugenii ENSMEUG00000011765 I 0.000
ENSMLUG00000000564 Myotis lucifugus ENSMLUG00000000564 I 0.000
ENSMMUG00000013164 Macaca mulatta ENSMMUG00000013164 I 0.000
ENSMMUG00000022399 Macaca mulatta ENSMMUG00000022399 I 0.000
ENSMMUP00000040972 Macaca fascicularis ENSMMUP00000040972 I 0.000
ENSOARG00000012702 Ovis aries ENSOARG00000012702 I 0.000
ENSOGAG00000024748 Otolemur garnettii ENSOGAG00000024748 N 0.000
ENSONIG00000011168 Oreochromis niloticus ENSONIG00000011168 I 0.000
ENSP00000260045 Macaca fascicularis ENSP00000260045 I 0.000
ENSP00000260045-D1 Bos grunniens ENSP00000260045-D1 I 0.000
ENSPCAG00000008407 Procavia capensis ENSPCAG00000008407 I 0.000
ENSTSYG00000000689 Tarsius syrichta ENSTSYG00000000689 I 0.000
ENSTSYG00000001778 Tarsius syrichta ENSTSYG00000001778 I 0.000
ENSTTRG00000012793 Tursiops truncatus ENSTTRG00000012793 I 0.000
Gfo_R003337 Geospiza fortis Gfo_R003337 I 0.000
prkrirb Danio rerio ENSDARG00000020964 D 0.000
prkrirb Takifugu rubripes ENSTRUG00000007070 I 0.000
prkrirb Tetraodon nigroviridis ENSTNIG00000003292 D 0.000
prkrirb Gasterosteus aculeatus ENSGACG00000010435 I 0.000
Pvit_02386 Pogona vitticeps Pvit_02386 I 0.000
Tal_R010930 Tyto alba Tal_R010930 I 0.000
THAP12 Meleagris gallopavo ENSMGAG00000015267 I 0.000
THAP12 Bos taurus ENSBTAG00000031609 I 0.000
thap12 Xenopus tropicalis XB-GENE-6073216 I 0.000
THAP12 Equus caballus ENSECAG00000021982 I 0.000
THAP12 Erinaceus europaeus ENSEEUG00000003060 I 0.000
THAP12 Tursiops truncatus ENSTTRG00000013287 I 0.000
THAP12 Taeniopygia guttata ENSTGUG00000013565 I 0.000
THAP12 Pan troglodytes ENSPTRG00000004091 I 0.000
THAP12 Felis catus ENSFCAG00000006764 I 0.000
THAP12 Ornithorhynchus anatinus ENSOANG00000000831 I 0.000
THAP12 Monodelphis domestica ENSMODG00000005315 I 0.000
THAP12 Gallus gallus ENSGALG00000000838 D 0.000