CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5AL_81EFE5211
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_5AL_81EFE5211
T130598_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN
NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.766
0.696
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5AL_81EFE5211.1
C2H2 ZF
30
52
FTCTYCNKKFYSSQALGGHQNAH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
20089_YOR028C
Saccharomyces mikatae
20089_YOR028C
I
23134_YOR028C
Saccharomyces bayanus
23134_YOR028C
I
AACERI_AaceriAEL222C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAEL222C
I
AGOS_AEL222C
Ashbya gossypii
AGOS_AEL222C
I
CIN5
Saccharomyces cerevisiae
YOR028C
D
Ecym_5580
Eremothecium cymbalariae
Ecym_5580
I
KLTH0E02222g
Lachancea thermotolerans
KLTH0E02222g
I
KLTH0E02222g
Kluyveromyces thermotolerans
KLTH0E02222g
I
Kwal_19947
Kluyveromyces waltii
Kwal_19947
I
SKUD_198303
Saccharomyces kudriavzevii
SKUD_198303
I
SU7_3200
Saccharomyces arboricola
SU7_3200
I
TBLA_0J00790
Tetrapisispora blattae
TBLA_0J00790
I