CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_40853
(
Trichoderma virens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRIVIDRAFT_40853
T130849_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
csp-1
M01876_2.00
Neurospora crassa
NNDWCCCYDN
NHRGGGWHNN
PBM
Weirauch et al.(2014)
pTH9015
0.798
0.933
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK16428
C2H2 ZF
101
128
YPCRYREIHGCEKTFTTSGHASRHSKIH
EHK16428
C2H2 ZF
135
158
HCQYPGCHKKFTRADNMKQHLETH
Links
Other
C2H2 ZF
family TFs
Other
Trichoderma virens
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA004093
Anopheles arabiensis
AARA004093
N
ACHR004622
Anopheles christyi
ACHR004622
N
AEPI002000
Anopheles epiroticus
AEPI002000
N
AGAP002753
Anopheles gambiae
AGAP002753
N
AMEC020569
Anopheles melas
AMEC020569
N
AMEM006240
Anopheles merus
AMEM006240
N
AQUA009784
Anopheles quadriannulatus
AQUA009784
N