CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VHEMI10121
(
Torrubiella hemipterigena
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
VHEMI10121
T131431_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.822
0.965
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.817
0.941
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEJ94602
C2H2 ZF
267
288
QRCTYPDCGKYFKDLKAHILTH
CEJ94602
C2H2 ZF
295
321
KCPIQTCEYHTKGFARKYDKNRHTLTH
CEJ94602
C2H2 ZF
326
356
MVCGFCPGSGSAAEKSFNRADVFKRHLTTVH
CEJ94602
C2H2 ZF
389
408
KCSTCSQTFSNAQDFYEHLD
Links
Other
C2H2 ZF
family TFs
Other
Torrubiella hemipterigena
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB005791
Biomphalaria glabrata
BGLB005791
N
ENSFCAG00000002365
Felis catus
ENSFCAG00000002365
N
ENSLAFG00000031654
Loxodonta africana
ENSLAFG00000031654
N
ENSMLUG00000030513
Myotis lucifugus
ENSMLUG00000030513
N
ENSMMUG00000012460
Macaca mulatta
ENSMMUG00000012460
N
ENSOCUG00000004030
Oryctolagus cuniculus
ENSOCUG00000004030
N
ENSPMAG00000007093
Petromyzon marinus
ENSPMAG00000007093
N
GLIS3
Sus scrofa
ENSSSCG00000005224
N