mnm-2 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00003380 T131562_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mnm-2
M00616_2.00		 Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY		 PBM
Narasimhan et al.(2015)
pTH9080		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00616_2.00 C2H2 ZF 51 73
M00616_2.00 C2H2 ZF 79 101
M00616_2.00 C2H2 ZF 107 129

DNA Binding Domains

Protein ID Domain From To Sequence
C10A4.8 C2H2 ZF 168 190
C10A4.8 C2H2 ZF 196 218
C10A4.8 C2H2 ZF 224 246

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG8281 Drosophila melanogaster FBgn0035824 D
GA20952 Drosophila pseudoobscura FBgn0080941 I
GE21643 Drosophila yakuba FBgn0238893 I
GF23799 Drosophila ananassae FBgn0100793 I
GG14454 Drosophila erecta FBgn0106713 I
GH14980 Drosophila grimshawi FBgn0122455 I
GJ13890 Drosophila virilis FBgn0201109 I
GK18054 Drosophila willistoni FBgn0220053 I
GM25005 Drosophila sechellia FBgn0179866 I
LCUP013401 Lucilia cuprina LCUP013401 I
MDOA002028 Musca domestica MDOA002028 I