pat-9 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00003933 T131568_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pat-9
M00620_2.00		 Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN		 PBM
Narasimhan et al.(2015)
pTH10808		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00620_2.00 C2H2 ZF 51 73
M00620_2.00 C2H2 ZF 79 101

DNA Binding Domains

Protein ID Domain From To Sequence
T27B1.2 C2H2 ZF 84 106
T27B1.2 C2H2 ZF 112 134

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

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30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action