WBGene00239980 (Onchocerca volvulus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00239980 T131676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.758 0.793
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.758 0.793
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.758 0.793
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.758 0.793
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.758 0.793
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OVOC3171 C2H2 ZF 221 248
OVOC3171 C2H2 ZF 254 276
OVOC3171 C2H2 ZF 282 306
OVOC3171 C2H2 ZF 312 336

Links

Other C2H2 ZF family TFs
Other Onchocerca volvulus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000097901 Angiostrongylus cantonensis ACAC_0000097901 N 0.000
ACOC_0001046901 Angiostrongylus costaricensis ACOC_0001046901 N 0.000
CJA38298 Caenorhabditis japonica CJA38298 N 0.000
DICVIV_03579 Dictyocaulus viviparus DICVIV_03579 N 0.000
DICVIV_12287 Dictyocaulus viviparus DICVIV_12287 N 0.000
Hba_18606 Heterorhabditis bacteriophora Hba_18606 N 0.000
HPLM_0000516101 Haemonchus placei HPLM_0000516101 N 0.000
OESDEN_03492 Oesophagostomum dentatum OESDEN_03492 N 0.000
OESDEN_06978 Oesophagostomum dentatum OESDEN_06978 N 0.000
OESDEN_10792 Oesophagostomum dentatum OESDEN_10792 N 0.000
OESDEN_21747 Oesophagostomum dentatum OESDEN_21747 N 0.000
TELCIR_15174 Teladorsagia circumcincta TELCIR_15174 N 0.000