Afo_R002924 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R002924 T132761_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IKZF1
M08939_2.00 		Homo sapiens
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C 		0.827 1.000
IKZF1
M10301_2.00 		Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN		 Transfac
Matys et al.(2006)
V$IK1_01 		0.827 1.000
IKZF1
M10302_2.00 		Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV		 Transfac
Matys et al.(2006)
V$IK2_01 		0.827 1.000
IKZF1
M10303_2.00 		Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM		 Transfac
Matys et al.(2006)
V$IK3_01 		0.827 1.000
IKZF1
M10304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5_01 		0.827 1.000
IKZF1
M10305_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5 		0.827 1.000
IKZF1
M10306_2.00 		Homo sapiens
YYTCCCARA
TYTGGGARR		 Transfac
Matys et al.(2006)
V$LYF1_01 		0.827 1.000
Ikzf1
M08969_2.00 		Mus musculus
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C 		0.827 0.989
IKZF2
M10105_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_01 		0.804 0.913
IKZF2
M10106_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_02 		0.804 0.913
IKZF3
M08320_2.00 		Homo sapiens
TTCCCNNSB
VSNNGGGAA		 ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE 		0.790 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R002924 C2H2 ZF 8 30
Afo_R002924 C2H2 ZF 36 58
Afo_R002924 C2H2 ZF 64 86
Afo_R002924 C2H2 ZF 92 115

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006277 Oryza indica BGIOSGA006277 N 0.000
BGIOSGA022378 Oryza indica BGIOSGA022378 N 0.000
BGIOSGA037035 Oryza indica BGIOSGA037035 N 0.000
BRADI3G45470 Brachypodium distachyon BRADI3G45470 N 0.000
BRADI4G41960 Brachypodium distachyon BRADI4G41960 N 0.000
GRMZM2G034868 Zea mays GRMZM2G034868 N 0.000
GRMZM2G043250 Zea mays GRMZM2G043250 N 0.000
MLOC_13034 Hordeum vulgare MLOC_13034 N 0.000
MLOC_43316 Hordeum vulgare MLOC_43316 N 0.000
OB02G27690 Oryza brachyantha OB02G27690 N 0.000
OB12G13670 Oryza brachyantha OB12G13670 N 0.000
OLONG_000187 Oryza longistaminata OLONG_000187 N 0.000
OLONG_002410 Oryza longistaminata OLONG_002410 N 0.000
OLONG_014957 Oryza longistaminata OLONG_014957 N 0.000
ONIVA02G22250 Oryza nivara ONIVA02G22250 N 0.000
ONIVA06G05610 Oryza nivara ONIVA06G05610 N 0.000
ORGLA02G0172700 Oryza glaberrima ORGLA02G0172700 N 0.000
ORGLA06G0040800 Oryza glaberrima ORGLA06G0040800 N 0.000
ORGLA12G0035900 Oryza glaberrima ORGLA12G0035900 N 0.000
OS02G0550900 Oryza sativa OS02G0550900 N 0.000
OS06G0166100 Oryza sativa OS06G0166100 N 0.000
OS12G0160900 Oryza sativa OS12G0160900 N 0.000
Pavir.Aa01718 Panicum virgatum Pavir.Aa01718 N 0.000
Pavir.Ab01899 Panicum virgatum Pavir.Ab01899 N 0.000
Pavir.Ca00202 Panicum virgatum Pavir.Ca00202 N 0.000
Pavir.Cb02030 Panicum virgatum Pavir.Cb02030 N 0.000
Sb04g022400 Sorghum bicolor Sb04g022400 N 0.000
Sb08g003780 Sorghum bicolor Sb08g003780 N 0.000
Si009370m.g Setaria italica Si009370m.g N 0.000
Si016477m.g Setaria italica Si016477m.g N 0.000
Traes_4AL_8B3A3CC2F Triticum aestivum Traes_4AL_8B3A3CC2F N 0.000
Traes_5AS_385093B54 Triticum aestivum Traes_5AS_385093B54 N 0.000
Traes_5BS_BCC406654 Triticum aestivum Traes_5BS_BCC406654 N 0.000
Traes_5DS_620A46565 Triticum aestivum Traes_5DS_620A46565 N 0.000
Traes_7BS_1B525AFF5 Triticum aestivum Traes_7BS_1B525AFF5 N 0.000
Traes_7DS_016F8E2EA Triticum aestivum Traes_7DS_016F8E2EA N 0.000
Traes_7DS_559DD9894 Triticum aestivum Traes_7DS_559DD9894 N 0.000
TRIUR3_03719 Triticum urartu TRIUR3_03719 N 0.000
TRIUR3_25143 Triticum urartu TRIUR3_25143 N 0.000